RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
CDH23-202ENST00000299366 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
CDH23-202ENST00000299366 RUFY1Q96T51 708 aa17.2■□□□□ 0.34
CDH23-202ENST00000299366 CENPHQ9H3R5 247 aa17.2■□□□□ 0.34
CDH23-202ENST00000299366 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
CDH23-202ENST00000299366 TNRQ92752 1358 aa17.2■□□□□ 0.34
CDH23-202ENST00000299366 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
CDH23-202ENST00000299366 FLT4P35916 1363 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 ANAPC15P60006 121 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 CDKL5O76039 1030 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 IGHMBP2P38935 993 aaKnown RBP17.19■□□□□ 0.34
CDH23-202ENST00000299366 IARSP41252 1262 aaKnown RBP17.19■□□□□ 0.34
CDH23-202ENST00000299366 AFMP43652 599 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 IL17REQ8NFR9 667 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 KIF2CQ99661 725 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 ZKSCAN3Q9BRR0 538 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 A0A087WWV3 80 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 FAM89AQ96GI7 184 aa17.19■□□□□ 0.34
CDH23-202ENST00000299366 MAGEC2Q9UBF1 373 aaPredicted RBP17.19■□□□□ 0.34
CDH23-202ENST00000299366 SLC9C2Q5TAH2 1124 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
CDH23-202ENST00000299366 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
CDH23-202ENST00000299366 ZSCAN25Q6NSZ9 544 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 SEC62Q99442 399 aaKnown RBP17.18■□□□□ 0.34
CDH23-202ENST00000299366 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 CCDC102AQ96A19 550 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 DEF6Q9H4E7 631 aa17.18■□□□□ 0.34
CDH23-202ENST00000299366 AKAP2Q9Y2D5 859 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 ERVK-7P63135 1459 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 CCDC171Q6TFL3 1326 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 METAP2P50579 478 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDH23-202ENST00000299366 PTH1RQ03431 593 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 MCMDC2Q4G0Z9 681 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 NOM1Q5C9Z4 860 aaKnown RBP17.17■□□□□ 0.34
CDH23-202ENST00000299366 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
CDH23-202ENST00000299366 TCEAL9Q9UHQ7 104 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 SGSM2O43147 1006 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
CDH23-202ENST00000299366 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
CDH23-202ENST00000299366 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
CDH23-202ENST00000299366 AKAP4Q5JQC9 854 aa17.16■□□□□ 0.34
CDH23-202ENST00000299366 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
CDH23-202ENST00000299366 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
CDH23-202ENST00000299366 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
CDH23-202ENST00000299366 PTPDC1A2A3K4 754 aa17.16■□□□□ 0.34
CDH23-202ENST00000299366 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
CDH23-202ENST00000299366 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
CDH23-202ENST00000299366 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 SMTNL1A8MU46 457 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 A1BGP04217 495 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 STX17P56962 302 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 MAP3K12Q12852 859 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 ZFYVE27Q5T4F4 411 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 RUFY3Q7L099 469 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 ANKRD18BA2A2Z9 1011 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 STX1AQ16623 288 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
CDH23-202ENST00000299366 ALG1Q9BT22 464 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 DNAI1Q9UI46 699 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 HSPA2P54652 639 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 CCDC43Q96MW1 224 aaKnown RBP17.15■□□□□ 0.34
CDH23-202ENST00000299366 PAG1Q9NWQ8 432 aa17.15■□□□□ 0.34
CDH23-202ENST00000299366 LTKP29376 864 aa17.14■□□□□ 0.34
CDH23-202ENST00000299366 CEP135Q66GS9 1140 aa17.14■□□□□ 0.34
CDH23-202ENST00000299366 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
CDH23-202ENST00000299366 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
CDH23-202ENST00000299366 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
CDH23-202ENST00000299366 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
CDH23-202ENST00000299366 MCM5P33992 734 aa17.14■□□□□ 0.33
CDH23-202ENST00000299366 ATP2B3Q16720 1220 aa17.14■□□□□ 0.33
CDH23-202ENST00000299366 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
CDH23-202ENST00000299366 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 PRC1O43663 620 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 SYKP43405 635 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 RBM5P52756 815 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDH23-202ENST00000299366 GNG11P61952 73 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 GPIHBP1Q8IV16 184 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
CDH23-202ENST00000299366 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 TAF3Q5VWG9 929 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 HS1BP3Q53T59 392 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 TMCO3Q6UWJ1 677 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 MKNK2Q9HBH9 465 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 ZNHIT6Q9NWK9 470 aaKnown RBP17.13■□□□□ 0.33
CDH23-202ENST00000299366 ABCC4O15439 1325 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
CDH23-202ENST00000299366 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
CDH23-202ENST00000299366 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
CDH23-202ENST00000299366 LIG1P18858 919 aa17.12■□□□□ 0.33
CDH23-202ENST00000299366 IBSPP21815 317 aaPredicted RBP17.12■□□□□ 0.33
CDH23-202ENST00000299366 SLC27A2O14975 620 aa17.12■□□□□ 0.33
CDH23-202ENST00000299366 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms