RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
CCDC36-201ENST00000296449 KIF20AO95235 890 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 ZNF589Q86UQ0 364 aaPredicted RBP12.04□□□□□ -0.48
CCDC36-201ENST00000296449 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
CCDC36-201ENST00000296449 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 FSD1Q9BTV5 496 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 BOLA2Q9H3K6 86 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 EID1Q9Y6B2 187 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 JCADQ9P266 1359 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 CAVIN2O95810 425 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 TNNT1P13805 278 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 G3BP1Q13283 466 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCDC36-201ENST00000296449 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 BICD2Q8TD16 824 aa12.04□□□□□ -0.48
CCDC36-201ENST00000296449 BICC1Q9H694 974 aaKnown RBP12.04□□□□□ -0.48
CCDC36-201ENST00000296449 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 KIF13AQ9H1H9 1805 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 JAK2O60674 1132 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 CCDC144BQ3MJ40 725 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 CCDC144CPQ8IYA2 1237 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 IP6K1Q92551 441 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 CLIP2Q9UDT6 1046 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 GRM8O00222 908 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
CCDC36-201ENST00000296449 RESTQ13127 1097 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
CCDC36-201ENST00000296449 CDC25BP30305 580 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 AKAP4Q5JQC9 854 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 ZNF530Q6P9A1 599 aaPredicted RBP12.02□□□□□ -0.49
CCDC36-201ENST00000296449 GTF3C6Q969F1 213 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 UTYO14607 1347 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 TAF5LO75529 589 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 LINS1Q8NG48 757 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 BRF1Q92994 677 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 PAXBP1Q9Y5B6 917 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 SLIT1O75093 1534 aa12.02□□□□□ -0.49
CCDC36-201ENST00000296449 IQCB1Q15051 598 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 SIL1Q9H173 461 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 LTN1O94822 1766 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 LMO7Q8WWI1 1683 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 PRAMEF22A3QJZ6 481 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 NAA30Q147X3 362 aaPredicted RBP12.01□□□□□ -0.49
CCDC36-201ENST00000296449 TPD52L1Q16890 204 aaPredicted RBP12.01□□□□□ -0.49
CCDC36-201ENST00000296449 CCDC112Q8NEF3 446 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 DDX11Q96FC9 970 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 OGFRQ9NZT2 677 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 CTNNA3Q9UI47 895 aa12.01□□□□□ -0.49
CCDC36-201ENST00000296449 COL15A1P39059 1388 aa12□□□□□ -0.49
CCDC36-201ENST00000296449 HEG1Q9ULI3 1381 aa12□□□□□ -0.49
CCDC36-201ENST00000296449 SARM1Q6SZW1 724 aa12□□□□□ -0.49
CCDC36-201ENST00000296449 EDC3Q96F86 508 aaKnown RBP12□□□□□ -0.49
CCDC36-201ENST00000296449 RNMTO43148 476 aaKnown RBP12□□□□□ -0.49
CCDC36-201ENST00000296449 FGD1P98174 961 aa12□□□□□ -0.49
CCDC36-201ENST00000296449 KRT32Q14532 448 aa12□□□□□ -0.49
CCDC36-201ENST00000296449 C11orf57Q6ZUT1 292 aaPredicted RBP12□□□□□ -0.49
CCDC36-201ENST00000296449 LRRC8AQ8IWT6 810 aa12□□□□□ -0.49
CCDC36-201ENST00000296449 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
CCDC36-201ENST00000296449 H3BQV1 296 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 NEK1Q96PY6 1258 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 ZSCAN16Q9H4T2 348 aaPredicted RBP11.99□□□□□ -0.49
CCDC36-201ENST00000296449 CFAP45Q9UL16 551 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 GOLGA6L19H0YKK7 550 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 NEMFO60524 1076 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
CCDC36-201ENST00000296449 CEBPAP49715 358 aaPredicted RBP11.99□□□□□ -0.49
CCDC36-201ENST00000296449 ARID5BQ14865 1188 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 PLEKHO1Q53GL0 409 aaPredicted RBP11.99□□□□□ -0.49
CCDC36-201ENST00000296449 CEP135Q66GS9 1140 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
CCDC36-201ENST00000296449 MRFAP1L1Q96HT8 127 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 CGNQ9P2M7 1197 aaKnown RBP11.99□□□□□ -0.49
CCDC36-201ENST00000296449 ARHGAP23Q9P227 1491 aa11.99□□□□□ -0.49
CCDC36-201ENST00000296449 NFAT5O94916 1531 aa11.98□□□□□ -0.49
CCDC36-201ENST00000296449 MRC1P22897 1456 aa11.98□□□□□ -0.49
CCDC36-201ENST00000296449 PXDNQ92626 1479 aa11.98□□□□□ -0.49
CCDC36-201ENST00000296449 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
CCDC36-201ENST00000296449 Q6ZUG5 572 aa11.98□□□□□ -0.49
CCDC36-201ENST00000296449 SETD1BQ9UPS6 1966 aaKnown RBP11.98□□□□□ -0.49
CCDC36-201ENST00000296449 USP27XA6NNY8 438 aa11.98□□□□□ -0.49
CCDC36-201ENST00000296449 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
CCDC36-201ENST00000296449 CEBPZQ03701 1054 aaKnown RBP11.98□□□□□ -0.49
CCDC36-201ENST00000296449 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
CCDC36-201ENST00000296449 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 HSP90B1P14625 803 aaKnown RBP11.97□□□□□ -0.49
CCDC36-201ENST00000296449 SCRN1Q12765 414 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 STX1AQ16623 288 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
CCDC36-201ENST00000296449 CTAGE5O15320 804 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 IGSF3O75054 1194 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 DDX58O95786 925 aaKnown RBP11.97□□□□□ -0.49
CCDC36-201ENST00000296449 KCNA6P17658 529 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 NYAP1Q6ZVC0 841 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 FTOQ9C0B1 505 aaKnown RBP eCLIP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms