RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 ATP5J2-PTCD1G3V325 749 aa14.28□□□□□ -0.12
CLPB-201ENST00000294053 PTCD1O75127 700 aaKnown RBP14.28□□□□□ -0.12
CLPB-201ENST00000294053 TATP17735 454 aaPredicted RBP14.28□□□□□ -0.12
CLPB-201ENST00000294053 PTH1RQ03431 593 aa14.28□□□□□ -0.12
CLPB-201ENST00000294053 EAF2Q96CJ1 260 aaPredicted RBP14.28□□□□□ -0.12
CLPB-201ENST00000294053 HYPKQ9NX55 129 aa14.28□□□□□ -0.12
CLPB-201ENST00000294053 MCM2P49736 904 aa14.27□□□□□ -0.12
CLPB-201ENST00000294053 CLASRPQ8N2M8 674 aaKnown RBP14.27□□□□□ -0.12
CLPB-201ENST00000294053 LINS1Q8NG48 757 aa14.27□□□□□ -0.12
CLPB-201ENST00000294053 HSPA4P34932 840 aa14.27□□□□□ -0.13
CLPB-201ENST00000294053 CCDC83Q8IWF9 413 aa14.27□□□□□ -0.13
CLPB-201ENST00000294053 EDC3Q96F86 508 aaKnown RBP14.27□□□□□ -0.13
CLPB-201ENST00000294053 LSG1Q9H089 658 aaKnown RBP14.27□□□□□ -0.13
CLPB-201ENST00000294053 CHGBP05060 677 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 MTX1Q13505 466 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 SPTLC3Q9NUV7 552 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 SNX14Q9Y5W7 946 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 CAMTA1Q9Y6Y1 1673 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 UBE2HP62256 183 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 AOX1Q06278 1338 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 STX6O43752 255 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 ALDH1L1O75891 902 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 IFIT2P09913 472 aaKnown RBP14.26□□□□□ -0.13
CLPB-201ENST00000294053 SYT1P21579 422 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
CLPB-201ENST00000294053 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
CLPB-201ENST00000294053 DCCP43146 1447 aa14.26□□□□□ -0.13
CLPB-201ENST00000294053 RAD50Q92878 1312 aa14.25□□□□□ -0.13
CLPB-201ENST00000294053 ADCK5Q3MIX3 580 aa14.25□□□□□ -0.13
CLPB-201ENST00000294053 NEURL1BA8MQ27 555 aa14.25□□□□□ -0.13
CLPB-201ENST00000294053 ZSCAN22P10073 491 aaPredicted RBP14.25□□□□□ -0.13
CLPB-201ENST00000294053 FILIP1Q7Z7B0 1213 aa14.25□□□□□ -0.13
CLPB-201ENST00000294053 FEZ1Q99689 392 aa14.25□□□□□ -0.13
CLPB-201ENST00000294053 BOLA2Q9H3K6 86 aa14.25□□□□□ -0.13
CLPB-201ENST00000294053 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
CLPB-201ENST00000294053 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
CLPB-201ENST00000294053 LARGE1O95461 756 aa14.24□□□□□ -0.13
CLPB-201ENST00000294053 ECHDC1Q9NTX5 307 aa14.24□□□□□ -0.13
CLPB-201ENST00000294053 KIF1AQ12756 1690 aa14.24□□□□□ -0.13
CLPB-201ENST00000294053 GLRX3O76003 335 aaKnown RBP14.24□□□□□ -0.13
CLPB-201ENST00000294053 GORABQ5T7V8 394 aa14.24□□□□□ -0.13
CLPB-201ENST00000294053 LRP10Q7Z4F1 713 aa14.24□□□□□ -0.13
CLPB-201ENST00000294053 ZFP91Q96JP5 570 aaPredicted RBP14.24□□□□□ -0.13
CLPB-201ENST00000294053 SCN11AQ9UI33 1791 aa14.24□□□□□ -0.13
CLPB-201ENST00000294053 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
CLPB-201ENST00000294053 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
CLPB-201ENST00000294053 GCKRQ14397 625 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 UBE3BQ7Z3V4 1068 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 NECAB1Q8N987 351 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 ANKRD7Q92527 254 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 CTNNA3Q9UI47 895 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 TCHHQ07283 1943 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 AK2P54819 239 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 ANAPC15P60006 121 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 CUL4AQ13619 759 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 HSP90AB4PQ58FF6 505 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
CLPB-201ENST00000294053 TTC5Q8N0Z6 440 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 TAF6LQ9Y6J9 622 aa14.23□□□□□ -0.13
CLPB-201ENST00000294053 CCDC66A2RUB6 948 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 TNNT3P45378 269 aaPredicted RBP14.22□□□□□ -0.13
CLPB-201ENST00000294053 CEBPZQ03701 1054 aaKnown RBP14.22□□□□□ -0.13
CLPB-201ENST00000294053 ANKRD13DQ6ZTN6 518 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 GTF3C6Q969F1 213 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 TAOK2Q9UL54 1235 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 COL18A1P39060 1754 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
CLPB-201ENST00000294053 G3BP1Q13283 466 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLPB-201ENST00000294053 TCEANC2Q96MN5 208 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 FOSBP53539 338 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 ARID5BQ14865 1188 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 ANO6Q4KMQ2 910 aa14.22□□□□□ -0.13
CLPB-201ENST00000294053 POLR3GO15318 223 aaPredicted RBP14.21□□□□□ -0.13
CLPB-201ENST00000294053 TAF3Q5VWG9 929 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 RUFY3Q7L099 469 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 KRT222Q8N1A0 295 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 TIGD1Q96MW7 591 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 ZNF215Q9UL58 517 aaPredicted RBP14.21□□□□□ -0.13
CLPB-201ENST00000294053 ATP6V1DQ9Y5K8 247 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 ADAMTS7Q9UKP4 1686 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 TTC41PQ6P2S7 1318 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 GJB2P29033 226 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 CABP4P57796 275 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 ELF2Q15723 593 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 CEP135Q66GS9 1140 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 LARP1Q6PKG0 1096 aaKnown RBP14.21□□□□□ -0.13
CLPB-201ENST00000294053 TNMDQ9H2S6 317 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 CLIP2Q9UDT6 1046 aa14.21□□□□□ -0.13
CLPB-201ENST00000294053 SPATA31A3Q5VYP0 1347 aa14.21□□□□□ -0.14
CLPB-201ENST00000294053 USP42Q9H9J4 1324 aaKnown RBP14.21□□□□□ -0.14
CLPB-201ENST00000294053 A0A0D9SFI3 127 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 F13A1P00488 732 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 SLFN14P0C7P3 912 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 NEXNQ0ZGT2 675 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 BICD2Q8TD16 824 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 INTS4Q96HW7 963 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms