RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 RPGRQ92834 1020 aaKnown RBP9.54□□□□□ -0.88
KIT-201ENST00000288135 GREM2Q9H772 168 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 SH3TC1Q8TE82 1336 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 CCDC144CPQ8IYA2 1237 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 PAG1Q9NWQ8 432 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 SRP68Q9UHB9 627 aaKnown RBP9.53□□□□□ -0.88
KIT-201ENST00000288135 PXDNQ92626 1479 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 DHX16O60231 1041 aaKnown RBP9.53□□□□□ -0.88
KIT-201ENST00000288135 HSPA1LP34931 641 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 SLC9C2Q5TAH2 1124 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 ANKRD18AQ8IVF6 992 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 NRXN3Q9Y4C0 1643 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 ZNF622Q969S3 477 aaKnown RBP eCLIP9.53□□□□□ -0.88
KIT-201ENST00000288135 NLRP3Q96P20 1036 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
KIT-201ENST00000288135 NRKQ7Z2Y5 1582 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 ADCY9O60503 1353 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 CAVIN4Q5BKX8 364 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 RNF214Q8ND24 703 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 SEC31BQ9NQW1 1179 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 SSH2Q76I76 1423 aa9.53□□□□□ -0.88
KIT-201ENST00000288135 USPL1Q5W0Q7 1092 aa9.52□□□□□ -0.88
KIT-201ENST00000288135 PI16Q6UXB8 463 aa9.52□□□□□ -0.88
KIT-201ENST00000288135 XAGE2Q96GT9 111 aa9.52□□□□□ -0.88
KIT-201ENST00000288135 CDC5LQ99459 802 aaKnown RBP9.52□□□□□ -0.88
KIT-201ENST00000288135 PALD1Q9ULE6 856 aa9.52□□□□□ -0.88
KIT-201ENST00000288135 KIF20BQ96Q89 1820 aa9.52□□□□□ -0.88
KIT-201ENST00000288135 MEGF6O75095 1541 aa9.52□□□□□ -0.88
KIT-201ENST00000288135 TRAPPC3LQ5T215 181 aa9.52□□□□□ -0.89
KIT-201ENST00000288135 NSFL1CQ9UNZ2 370 aaKnown RBP9.52□□□□□ -0.89
KIT-201ENST00000288135 F8W031 263 aaPredicted RBP9.52□□□□□ -0.89
KIT-201ENST00000288135 ADORA1P30542 326 aa9.52□□□□□ -0.89
KIT-201ENST00000288135 RBM5P52756 815 aaKnown RBP eCLIP9.52□□□□□ -0.89
KIT-201ENST00000288135 LARP1BQ659C4 914 aaKnown RBP9.52□□□□□ -0.89
KIT-201ENST00000288135 TMX3Q96JJ7 454 aa9.52□□□□□ -0.89
KIT-201ENST00000288135 IBTKQ9P2D0 1353 aaPredicted RBP9.52□□□□□ -0.89
KIT-201ENST00000288135 ERICH2A1L162 156 aa9.52□□□□□ -0.89
KIT-201ENST00000288135 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.52□□□□□ -0.89
KIT-201ENST00000288135 SASH1O94885 1247 aa9.52□□□□□ -0.89
KIT-201ENST00000288135 MCM4P33991 863 aa9.52□□□□□ -0.89
KIT-201ENST00000288135 ATP2B2Q01814 1243 aa9.52□□□□□ -0.89
KIT-201ENST00000288135 AKAP17AQ02040 695 aaKnown RBP9.52□□□□□ -0.89
KIT-201ENST00000288135 TNPO1Q92973 898 aaKnown RBP9.52□□□□□ -0.89
KIT-201ENST00000288135 SEPT12Q8IYM1 358 aa9.51□□□□□ -0.89
KIT-201ENST00000288135 MARCH10Q8NA82 808 aaPredicted RBP9.51□□□□□ -0.89
KIT-201ENST00000288135 BICD2Q8TD16 824 aa9.51□□□□□ -0.89
KIT-201ENST00000288135 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
KIT-201ENST00000288135 CD2BP2O95400 341 aaKnown RBP9.51□□□□□ -0.89
KIT-201ENST00000288135 TPTE2Q6XPS3 522 aa9.51□□□□□ -0.89
KIT-201ENST00000288135 MAP3K15Q6ZN16 1313 aa9.51□□□□□ -0.89
KIT-201ENST00000288135 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
KIT-201ENST00000288135 NAPBQ9H115 298 aa9.51□□□□□ -0.89
KIT-201ENST00000288135 AFF2P51816 1311 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
KIT-201ENST00000288135 APBA3O96018 575 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 IMMTQ16891 758 aaKnown RBP9.5□□□□□ -0.89
KIT-201ENST00000288135 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 TTC41PQ6P2S7 1318 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 RIMBP2O15034 1052 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 PDE8AO60658 829 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 ZAP70P43403 619 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 PTH1RQ03431 593 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
KIT-201ENST00000288135 MPNDQ8N594 471 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 A0A0D9SFI3 127 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 CHGBP05060 677 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 PDIA6Q15084 440 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 CPLX2Q6PUV4 134 aaKnown RBP9.5□□□□□ -0.89
KIT-201ENST00000288135 FAM196AQ6ZSG2 479 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 BRF1Q92994 677 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 MCM2P49736 904 aa9.5□□□□□ -0.89
KIT-201ENST00000288135 PTPN12Q05209 780 aaKnown RBP9.5□□□□□ -0.89
KIT-201ENST00000288135 ANTXR1Q9H6X2 564 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 CEMIPQ8WUJ3 1361 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 ZNF213O14771 459 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 CTSWP56202 376 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 MCMDC2Q4G0Z9 681 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 DZIP1Q86YF9 867 aaKnown RBP9.49□□□□□ -0.89
KIT-201ENST00000288135 AMOTL1Q8IY63 956 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 MAGEB6Q8N7X4 407 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 ZBTB38Q8NAP3 1195 aaPredicted RBP9.49□□□□□ -0.89
KIT-201ENST00000288135 NACAP1Q9BZK3 213 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 U3KPZ7 1027 aaPredicted RBP9.49□□□□□ -0.89
KIT-201ENST00000288135 RXRAP19793 462 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 ZSCAN25Q6NSZ9 544 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 NLRP10Q86W26 655 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 PALLDQ8WX93 1383 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 CYP7A1P22680 504 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 AK2P54819 239 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 CREB3L3Q68CJ9 461 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 DRC7Q8IY82 874 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 LIMCH1Q9UPQ0 1083 aa9.49□□□□□ -0.89
KIT-201ENST00000288135 RANBP6O60518 1105 aaKnown RBP9.48□□□□□ -0.89
KIT-201ENST00000288135 SUSD4Q5VX71 490 aa9.48□□□□□ -0.89
KIT-201ENST00000288135 NEK1Q96PY6 1258 aa9.48□□□□□ -0.89
KIT-201ENST00000288135 ATP6V1DQ9Y5K8 247 aa9.48□□□□□ -0.89
KIT-201ENST00000288135 SGSM2O43147 1006 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms