RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ERC2O15083 957 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 SRGAP3O43295 1099 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 ATP6V1AP38606 617 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 TXNRD1Q16881 649 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 LINC00116Q8NCU8 138 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 SURF6O75683 361 aaKnown RBP9.13□□□□□ -0.95
TRIM42-201ENST00000286349 CYP19A1P11511 503 aaPredicted RBP9.13□□□□□ -0.95
TRIM42-201ENST00000286349 PDIA6Q15084 440 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 NBPF9Q3BBW0 867 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 SMIM5Q71RC9 77 aa9.13□□□□□ -0.95
TRIM42-201ENST00000286349 OTUD7AQ8TE49 926 aaPredicted RBP9.13□□□□□ -0.95
TRIM42-201ENST00000286349 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
TRIM42-201ENST00000286349 A1BGP04217 495 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 NBPF7P0C2Y1 421 aaPredicted RBP9.12□□□□□ -0.95
TRIM42-201ENST00000286349 PIP4K2AP48426 406 aaPredicted RBP9.12□□□□□ -0.95
TRIM42-201ENST00000286349 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
TRIM42-201ENST00000286349 TMTC2Q8N394 836 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 USP26Q9BXU7 913 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 SLKQ9H2G2 1235 aaPredicted RBP9.12□□□□□ -0.95
TRIM42-201ENST00000286349 CCNL1Q9UK58 526 aaPredicted RBP9.12□□□□□ -0.95
TRIM42-201ENST00000286349 UBR2Q8IWV8 1755 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 KAT6BQ8WYB5 2073 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 TNS1Q9HBL0 1735 aaKnown RBP9.12□□□□□ -0.95
TRIM42-201ENST00000286349 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
TRIM42-201ENST00000286349 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 RHPN1Q8TCX5 695 aa9.12□□□□□ -0.95
TRIM42-201ENST00000286349 GRM8O00222 908 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 PROSER3Q2NL68 480 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 KIF2CQ99661 725 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 LAMB4A4D0S4 1761 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 TTC41PQ6P2S7 1318 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
TRIM42-201ENST00000286349 ANXA1P04083 346 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 SEMA3FQ13275 785 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 GPATCH3Q96I76 525 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 USP42Q9H9J4 1324 aaKnown RBP9.11□□□□□ -0.95
TRIM42-201ENST00000286349 C5P01031 1676 aa9.11□□□□□ -0.95
TRIM42-201ENST00000286349 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
TRIM42-201ENST00000286349 METTL22Q9BUU2 404 aaPredicted RBP9.1□□□□□ -0.95
TRIM42-201ENST00000286349 COL15A1P39059 1388 aa9.1□□□□□ -0.95
TRIM42-201ENST00000286349 IRF6O14896 467 aa9.1□□□□□ -0.95
TRIM42-201ENST00000286349 ST18O60284 1047 aa9.1□□□□□ -0.95
TRIM42-201ENST00000286349 FRAT2O75474 233 aaPredicted RBP9.1□□□□□ -0.95
TRIM42-201ENST00000286349 CRKLP46109 303 aaKnown RBP9.1□□□□□ -0.95
TRIM42-201ENST00000286349 CLASRPQ8N2M8 674 aaKnown RBP9.1□□□□□ -0.95
TRIM42-201ENST00000286349 TUBGCP6Q96RT7 1819 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 TRIM6-TRIM34B2RNG4 842 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 TERF1P54274 439 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 ANKRD13DQ6ZTN6 518 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 TEX13AQ9BXU3 409 aaPredicted RBP9.09□□□□□ -0.95
TRIM42-201ENST00000286349 ZBTB1Q9Y2K1 713 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 LY75O60449 1722 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
TRIM42-201ENST00000286349 ZNF827Q17R98 1081 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 CNTROBQ8N137 903 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 OTUD6BQ8N6M0 293 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 AKT1S1Q96B36 256 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 TJP1Q07157 1748 aa9.09□□□□□ -0.95
TRIM42-201ENST00000286349 NEURL1BA8MQ27 555 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 GLRX3O76003 335 aaKnown RBP9.08□□□□□ -0.96
TRIM42-201ENST00000286349 STARD3NLO95772 234 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 BAG6P46379 1132 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 SF3B2Q13435 895 aaKnown RBP9.08□□□□□ -0.96
TRIM42-201ENST00000286349 RC3H1Q5TC82 1133 aaKnown RBP9.08□□□□□ -0.96
TRIM42-201ENST00000286349 COPS6Q7L5N1 327 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 ESYT1Q9BSJ8 1104 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 MYL6BP14649 208 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 CHMLP26374 656 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 DDIT3P35638 169 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 MCM2P49736 904 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 CWF19L2Q2TBE0 894 aaKnown RBP9.08□□□□□ -0.96
TRIM42-201ENST00000286349 PLBD2Q8NHP8 589 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 RILPL2Q969X0 211 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
TRIM42-201ENST00000286349 G3BP1Q13283 466 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRIM42-201ENST00000286349 GCKRQ14397 625 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 IL1RAPL2Q9NP60 686 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 RAI14Q9P0K7 980 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 CNTNAP4Q9C0A0 1308 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 ZNF831Q5JPB2 1677 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 IGKV5-2P06315 115 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 ZSCAN20P17040 1043 aaPredicted RBP9.07□□□□□ -0.96
TRIM42-201ENST00000286349 EIF5P55010 431 aaKnown RBP9.07□□□□□ -0.96
TRIM42-201ENST00000286349 EXOC8Q8IYI6 725 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 PI4K2BQ8TCG2 481 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 IL17RAQ96F46 866 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 SUCLG2Q96I99 432 aa9.07□□□□□ -0.96
TRIM42-201ENST00000286349 DDX11L8A8MPP1 907 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 IFIT2P09913 472 aaKnown RBP9.06□□□□□ -0.96
TRIM42-201ENST00000286349 L1TD1Q5T7N2 865 aaKnown RBP9.06□□□□□ -0.96
TRIM42-201ENST00000286349 TTLL7Q6ZT98 887 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 MYD88Q99836 296 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 BICC1Q9H694 974 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms