RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
ACER3-201ENST00000278544 WTIPA6NIX2 430 aaPredicted RBP16.35■□□□□ 0.21
ACER3-201ENST00000278544 CTSWP56202 376 aa16.35■□□□□ 0.21
ACER3-201ENST00000278544 MTX1Q13505 466 aa16.35■□□□□ 0.21
ACER3-201ENST00000278544 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
ACER3-201ENST00000278544 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
ACER3-201ENST00000278544 NFIXQ14938 502 aa16.34■□□□□ 0.21
ACER3-201ENST00000278544 TTC22Q5TAA0 569 aa16.34■□□□□ 0.21
ACER3-201ENST00000278544 DBNDD2Q9BQY9 259 aa16.34■□□□□ 0.21
ACER3-201ENST00000278544 NTSR2O95665 410 aa16.33■□□□□ 0.21
ACER3-201ENST00000278544 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.21
ACER3-201ENST00000278544 RABL6Q3YEC7 729 aaPredicted RBP16.33■□□□□ 0.21
ACER3-201ENST00000278544 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
ACER3-201ENST00000278544 CHGBP05060 677 aa16.33■□□□□ 0.2
ACER3-201ENST00000278544 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
ACER3-201ENST00000278544 ANO8Q9HCE9 1232 aaPredicted RBP16.33■□□□□ 0.2
ACER3-201ENST00000278544 PDE8AO60658 829 aa16.32■□□□□ 0.2
ACER3-201ENST00000278544 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
ACER3-201ENST00000278544 SF3B2Q13435 895 aaKnown RBP16.32■□□□□ 0.2
ACER3-201ENST00000278544 HSP90AB4PQ58FF6 505 aa16.32■□□□□ 0.2
ACER3-201ENST00000278544 METTL24Q5JXM2 366 aa16.32■□□□□ 0.2
ACER3-201ENST00000278544 SBF2Q86WG5 1849 aa16.32■□□□□ 0.2
ACER3-201ENST00000278544 TBC1D9Q6ZT07 1266 aa16.32■□□□□ 0.2
ACER3-201ENST00000278544 ANKRD18BA2A2Z9 1011 aa16.32■□□□□ 0.2
ACER3-201ENST00000278544 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
ACER3-201ENST00000278544 NUP98P52948 1817 aa16.31■□□□□ 0.2
ACER3-201ENST00000278544 ATG9AQ7Z3C6 839 aa16.31■□□□□ 0.2
ACER3-201ENST00000278544 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
ACER3-201ENST00000278544 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
ACER3-201ENST00000278544 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
ACER3-201ENST00000278544 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
ACER3-201ENST00000278544 MPHOSPH8Q99549 860 aa16.31■□□□□ 0.2
ACER3-201ENST00000278544 COPRSQ9NQ92 184 aa16.31■□□□□ 0.2
ACER3-201ENST00000278544 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
ACER3-201ENST00000278544 EYA2O00167 538 aa16.31■□□□□ 0.2
ACER3-201ENST00000278544 ADORA1P30542 326 aa16.31■□□□□ 0.2
ACER3-201ENST00000278544 GYS1P13807 737 aa16.3■□□□□ 0.2
ACER3-201ENST00000278544 CEP126Q9P2H0 1117 aa16.3■□□□□ 0.2
ACER3-201ENST00000278544 DBNLQ9UJU6 430 aaKnown RBP16.3■□□□□ 0.2
ACER3-201ENST00000278544 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
ACER3-201ENST00000278544 SLFNL1Q499Z3 407 aa16.3■□□□□ 0.2
ACER3-201ENST00000278544 ABCC12Q96J65 1359 aa16.3■□□□□ 0.2
ACER3-201ENST00000278544 TNNI3KQ59H18 835 aa16.29■□□□□ 0.2
ACER3-201ENST00000278544 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
ACER3-201ENST00000278544 FPGT-TNNI3KV9GXZ4 949 aa16.29■□□□□ 0.2
ACER3-201ENST00000278544 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
ACER3-201ENST00000278544 SLC27A3Q5K4L6 730 aa16.29■□□□□ 0.2
ACER3-201ENST00000278544 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
ACER3-201ENST00000278544 NUP188Q5SRE5 1749 aa16.28■□□□□ 0.2
ACER3-201ENST00000278544 PI16Q6UXB8 463 aa16.28■□□□□ 0.2
ACER3-201ENST00000278544 TPTE2Q6XPS3 522 aa16.28■□□□□ 0.2
ACER3-201ENST00000278544 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
ACER3-201ENST00000278544 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
ACER3-201ENST00000278544 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
ACER3-201ENST00000278544 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
ACER3-201ENST00000278544 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
ACER3-201ENST00000278544 ANP32AP39687 249 aaKnown RBP16.27■□□□□ 0.2
ACER3-201ENST00000278544 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.2
ACER3-201ENST00000278544 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
ACER3-201ENST00000278544 CSF1RP07333 972 aa16.27■□□□□ 0.19
ACER3-201ENST00000278544 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.19
ACER3-201ENST00000278544 PI4K2BQ8TCG2 481 aa16.27■□□□□ 0.19
ACER3-201ENST00000278544 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.19
ACER3-201ENST00000278544 SERPINB2P05120 415 aa16.26■□□□□ 0.19
ACER3-201ENST00000278544 CWC27Q6UX04 472 aaKnown RBP16.26■□□□□ 0.19
ACER3-201ENST00000278544 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
ACER3-201ENST00000278544 PLSCR1O15162 318 aa16.25■□□□□ 0.19
ACER3-201ENST00000278544 IL15P40933 162 aaPredicted RBP16.25■□□□□ 0.19
ACER3-201ENST00000278544 DDR1Q08345 913 aa16.25■□□□□ 0.19
ACER3-201ENST00000278544 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
ACER3-201ENST00000278544 JAG2Q9Y219 1238 aa16.25■□□□□ 0.19
ACER3-201ENST00000278544 IL25Q9H293 177 aa16.25■□□□□ 0.19
ACER3-201ENST00000278544 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
ACER3-201ENST00000278544 TAF1P21675 1872 aa16.25■□□□□ 0.19
ACER3-201ENST00000278544 CDC45O75419 566 aa16.25■□□□□ 0.19
ACER3-201ENST00000278544 GPR101Q96P66 508 aaPredicted RBP16.25■□□□□ 0.19
ACER3-201ENST00000278544 MMP10P09238 476 aa16.24■□□□□ 0.19
ACER3-201ENST00000278544 SALL3Q9BXA9 1300 aa16.24■□□□□ 0.19
ACER3-201ENST00000278544 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
ACER3-201ENST00000278544 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
ACER3-201ENST00000278544 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
ACER3-201ENST00000278544 CDHR2Q9BYE9 1310 aa16.24■□□□□ 0.19
ACER3-201ENST00000278544 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
ACER3-201ENST00000278544 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
ACER3-201ENST00000278544 GOLIM4O00461 696 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 GPATCH3Q96I76 525 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 XAGE2Q96GT9 111 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 SSFA2P28290 1259 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 ATP2B3Q16720 1220 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 OLFM4Q6UX06 510 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 ANTXR1Q9H6X2 564 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 ANO2Q9NQ90 1003 aa16.23■□□□□ 0.19
ACER3-201ENST00000278544 BAG6P46379 1132 aa16.22■□□□□ 0.19
ACER3-201ENST00000278544 SCARF1Q14162 830 aa16.22■□□□□ 0.19
ACER3-201ENST00000278544 RIPOR2Q9Y4F9 1068 aa16.22■□□□□ 0.19
ACER3-201ENST00000278544 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
ACER3-201ENST00000278544 CAMKK2Q96RR4 588 aa16.22■□□□□ 0.19
ACER3-201ENST00000278544 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
ACER3-201ENST00000278544 CARMIL3Q8ND23 1372 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms