RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ZNF827Q17R98 1081 aa14.4□□□□□ -0.1
SSRP1-201ENST00000278412 ANO8Q9HCE9 1232 aaPredicted RBP14.4□□□□□ -0.1
SSRP1-201ENST00000278412 DBNLQ9UJU6 430 aaKnown RBP14.4□□□□□ -0.1
SSRP1-201ENST00000278412 RTCBQ9Y3I0 505 aaKnown RBP14.4□□□□□ -0.1
SSRP1-201ENST00000278412 TUBGCP6Q96RT7 1819 aa14.4□□□□□ -0.1
SSRP1-201ENST00000278412 ITGA6P23229 1130 aa14.4□□□□□ -0.1
SSRP1-201ENST00000278412 CTSWP56202 376 aa14.4□□□□□ -0.1
SSRP1-201ENST00000278412 DBNDD2Q9BQY9 259 aa14.4□□□□□ -0.1
SSRP1-201ENST00000278412 CLASRPQ8N2M8 674 aaKnown RBP14.39□□□□□ -0.11
SSRP1-201ENST00000278412 HELBQ8NG08 1087 aaPredicted RBP14.39□□□□□ -0.11
SSRP1-201ENST00000278412 AK7Q96M32 723 aa14.39□□□□□ -0.11
SSRP1-201ENST00000278412 ABCC12Q96J65 1359 aa14.39□□□□□ -0.11
SSRP1-201ENST00000278412 HSP90AB3PQ58FF7 597 aa14.39□□□□□ -0.11
SSRP1-201ENST00000278412 UTP14AQ9BVJ6 771 aaKnown RBP14.39□□□□□ -0.11
SSRP1-201ENST00000278412 OSBPL3Q9H4L5 887 aa14.39□□□□□ -0.11
SSRP1-201ENST00000278412 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
SSRP1-201ENST00000278412 BCORQ6W2J9 1755 aa14.39□□□□□ -0.11
SSRP1-201ENST00000278412 CSF1RP07333 972 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 STAP2Q9UGK3 403 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 CCDC57Q2TAC2 916 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 SLFNL1Q499Z3 407 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 TNNI3KQ59H18 835 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 BOLA2Q9H3K6 86 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 NARFQ9UHQ1 456 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 FPGT-TNNI3KV9GXZ4 949 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 ZNF831Q5JPB2 1677 aa14.38□□□□□ -0.11
SSRP1-201ENST00000278412 IFIT2P09913 472 aaKnown RBP14.37□□□□□ -0.11
SSRP1-201ENST00000278412 ADORA1P30542 326 aa14.37□□□□□ -0.11
SSRP1-201ENST00000278412 DDX60Q8IY21 1712 aaKnown RBP14.37□□□□□ -0.11
SSRP1-201ENST00000278412 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
SSRP1-201ENST00000278412 MYH3P11055 1940 aa14.37□□□□□ -0.11
SSRP1-201ENST00000278412 EYA2O00167 538 aa14.37□□□□□ -0.11
SSRP1-201ENST00000278412 ZPR1O75312 459 aa14.37□□□□□ -0.11
SSRP1-201ENST00000278412 NEUROD6Q96NK8 337 aa14.37□□□□□ -0.11
SSRP1-201ENST00000278412 HDAC5Q9UQL6 1122 aa14.37□□□□□ -0.11
SSRP1-201ENST00000278412 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
SSRP1-201ENST00000278412 CDC45O75419 566 aa14.36□□□□□ -0.11
SSRP1-201ENST00000278412 RFC4P35249 363 aa14.36□□□□□ -0.11
SSRP1-201ENST00000278412 IFIT5Q13325 482 aaKnown RBP14.36□□□□□ -0.11
SSRP1-201ENST00000278412 HSP90AB4PQ58FF6 505 aa14.36□□□□□ -0.11
SSRP1-201ENST00000278412 TRAPPC3LQ5T215 181 aa14.36□□□□□ -0.11
SSRP1-201ENST00000278412 PLA2G12BQ9BX93 195 aa14.36□□□□□ -0.11
SSRP1-201ENST00000278412 UBR3Q6ZT12 1888 aa14.36□□□□□ -0.11
SSRP1-201ENST00000278412 USP42Q9H9J4 1324 aaKnown RBP14.35□□□□□ -0.11
SSRP1-201ENST00000278412 PDE8AO60658 829 aa14.35□□□□□ -0.11
SSRP1-201ENST00000278412 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
SSRP1-201ENST00000278412 TAF5LO75529 589 aa14.35□□□□□ -0.11
SSRP1-201ENST00000278412 ANP32AP39687 249 aaKnown RBP14.35□□□□□ -0.11
SSRP1-201ENST00000278412 NFIXQ14938 502 aa14.35□□□□□ -0.11
SSRP1-201ENST00000278412 TAF7LQ5H9L4 462 aa14.35□□□□□ -0.11
SSRP1-201ENST00000278412 SPEF2Q9C093 1822 aa14.35□□□□□ -0.11
SSRP1-201ENST00000278412 EN1Q05925 392 aaPredicted RBP14.34□□□□□ -0.11
SSRP1-201ENST00000278412 PI16Q6UXB8 463 aa14.34□□□□□ -0.11
SSRP1-201ENST00000278412 ERC1Q8IUD2 1116 aa14.34□□□□□ -0.11
SSRP1-201ENST00000278412 TBC1D32Q96NH3 1257 aa14.34□□□□□ -0.11
SSRP1-201ENST00000278412 ECHDC1Q9NTX5 307 aa14.34□□□□□ -0.11
SSRP1-201ENST00000278412 RIC1Q4ADV7 1423 aa14.34□□□□□ -0.11
SSRP1-201ENST00000278412 LDHAL6AQ6ZMR3 332 aa14.34□□□□□ -0.11
SSRP1-201ENST00000278412 PDGFDQ9GZP0 370 aaPredicted RBP14.34□□□□□ -0.11
SSRP1-201ENST00000278412 DEKP35659 375 aaKnown RBP14.33□□□□□ -0.11
SSRP1-201ENST00000278412 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.11
SSRP1-201ENST00000278412 C22orf23Q9BZE7 217 aa14.33□□□□□ -0.11
SSRP1-201ENST00000278412 A0A1B0GUL7 405 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 GYS1P13807 737 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 NBPF5PQ86XG9 351 aaPredicted RBP14.33□□□□□ -0.12
SSRP1-201ENST00000278412 SETDB2Q96T68 719 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 RIPOR2Q9Y4F9 1068 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 CASZ1Q86V15 1759 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 CHMLP26374 656 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 EZH2Q15910 746 aaKnown RBP14.33□□□□□ -0.12
SSRP1-201ENST00000278412 MSL1Q68DK7 614 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 CLEC4GQ6UXB4 293 aa14.33□□□□□ -0.12
SSRP1-201ENST00000278412 GTF2E1P29083 439 aaPredicted RBP14.32□□□□□ -0.12
SSRP1-201ENST00000278412 SCARF1Q14162 830 aa14.32□□□□□ -0.12
SSRP1-201ENST00000278412 DNAJC2Q99543 621 aaKnown RBP14.32□□□□□ -0.12
SSRP1-201ENST00000278412 SNRKQ9NRH2 765 aa14.32□□□□□ -0.12
SSRP1-201ENST00000278412 CNNM1Q9NRU3 951 aa14.32□□□□□ -0.12
SSRP1-201ENST00000278412 ANKRD18BA2A2Z9 1011 aa14.32□□□□□ -0.12
SSRP1-201ENST00000278412 PARP10Q53GL7 1025 aa14.32□□□□□ -0.12
SSRP1-201ENST00000278412 TFCP2L1Q9NZI6 479 aa14.32□□□□□ -0.12
SSRP1-201ENST00000278412 AK9Q5TCS8 1911 aa14.32□□□□□ -0.12
SSRP1-201ENST00000278412 COL23A1Q86Y22 540 aaPredicted RBP14.31□□□□□ -0.12
SSRP1-201ENST00000278412 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
SSRP1-201ENST00000278412 IPO9Q96P70 1041 aaKnown RBP14.31□□□□□ -0.12
SSRP1-201ENST00000278412 CARMIL3Q8ND23 1372 aa14.31□□□□□ -0.12
SSRP1-201ENST00000278412 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
SSRP1-201ENST00000278412 METTL24Q5JXM2 366 aa14.31□□□□□ -0.12
SSRP1-201ENST00000278412 CWC27Q6UX04 472 aaKnown RBP14.31□□□□□ -0.12
SSRP1-201ENST00000278412 DDX46Q7L014 1031 aaKnown RBP14.31□□□□□ -0.12
SSRP1-201ENST00000278412 KIF2CQ99661 725 aa14.31□□□□□ -0.12
SSRP1-201ENST00000278412 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
SSRP1-201ENST00000278412 TNRC6CQ9HCJ0 1690 aaKnown RBP14.31□□□□□ -0.12
SSRP1-201ENST00000278412 DDR1Q08345 913 aa14.3□□□□□ -0.12
SSRP1-201ENST00000278412 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
SSRP1-201ENST00000278412 TNS1Q9HBL0 1735 aaKnown RBP14.3□□□□□ -0.12
SSRP1-201ENST00000278412 ZNF609O15014 1411 aa14.3□□□□□ -0.12
SSRP1-201ENST00000278412 SLC27A3Q5K4L6 730 aa14.3□□□□□ -0.12
SSRP1-201ENST00000278412 VGLL2Q8N8G2 317 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms