RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 RAD17O75943 681 aa16.24■□□□□ 0.19
MRPS28-201ENST00000276585 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
MRPS28-201ENST00000276585 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
MRPS28-201ENST00000276585 PRKRIP1Q9H875 184 aaPredicted RBP16.24■□□□□ 0.19
MRPS28-201ENST00000276585 CNOT7Q9UIV1 285 aaKnown RBP16.24■□□□□ 0.19
MRPS28-201ENST00000276585 TBC1D8O95759 1140 aa16.23■□□□□ 0.19
MRPS28-201ENST00000276585 TNIP1Q15025 636 aa16.23■□□□□ 0.19
MRPS28-201ENST00000276585 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
MRPS28-201ENST00000276585 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
MRPS28-201ENST00000276585 COLQQ9Y215 455 aaPredicted RBP16.23■□□□□ 0.19
MRPS28-201ENST00000276585 SHTN1A0MZ66 631 aa16.22■□□□□ 0.19
MRPS28-201ENST00000276585 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
MRPS28-201ENST00000276585 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
MRPS28-201ENST00000276585 ABCC12Q96J65 1359 aa16.22■□□□□ 0.19
MRPS28-201ENST00000276585 POTEFA5A3E0 1075 aa16.21■□□□□ 0.19
MRPS28-201ENST00000276585 ADM5C9JUS6 153 aa16.21■□□□□ 0.19
MRPS28-201ENST00000276585 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
MRPS28-201ENST00000276585 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.19
MRPS28-201ENST00000276585 RBM17Q96I25 401 aaKnown RBP16.21■□□□□ 0.19
MRPS28-201ENST00000276585 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
MRPS28-201ENST00000276585 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
MRPS28-201ENST00000276585 RASAL3Q86YV0 1011 aa16.2■□□□□ 0.18
MRPS28-201ENST00000276585 SUPT20HQ8NEM7 779 aa16.2■□□□□ 0.18
MRPS28-201ENST00000276585 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
MRPS28-201ENST00000276585 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
MRPS28-201ENST00000276585 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
MRPS28-201ENST00000276585 CUL9Q8IWT3 2517 aa16.2■□□□□ 0.18
MRPS28-201ENST00000276585 SZT2Q5T011 3432 aa16.2■□□□□ 0.18
MRPS28-201ENST00000276585 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
MRPS28-201ENST00000276585 TRIOBPQ9H2D6 2365 aa16.19■□□□□ 0.18
MRPS28-201ENST00000276585 HOXA10P31260 410 aaPredicted RBP16.19■□□□□ 0.18
MRPS28-201ENST00000276585 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
MRPS28-201ENST00000276585 SAMD7Q7Z3H4 446 aa16.19■□□□□ 0.18
MRPS28-201ENST00000276585 NUP98P52948 1817 aa16.18■□□□□ 0.18
MRPS28-201ENST00000276585 GPR25O00155 361 aa16.18■□□□□ 0.18
MRPS28-201ENST00000276585 CRAMP1Q96RY5 1269 aa16.18■□□□□ 0.18
MRPS28-201ENST00000276585 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
MRPS28-201ENST00000276585 NEFMP07197 916 aa16.17■□□□□ 0.18
MRPS28-201ENST00000276585 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
MRPS28-201ENST00000276585 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
MRPS28-201ENST00000276585 HLFQ16534 295 aa16.17■□□□□ 0.18
MRPS28-201ENST00000276585 RBM26Q5T8P6 1007 aaKnown RBP16.17■□□□□ 0.18
MRPS28-201ENST00000276585 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
MRPS28-201ENST00000276585 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
MRPS28-201ENST00000276585 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
MRPS28-201ENST00000276585 PNNQ9H307 717 aaKnown RBP16.17■□□□□ 0.18
MRPS28-201ENST00000276585 RIC1Q4ADV7 1423 aa16.17■□□□□ 0.18
MRPS28-201ENST00000276585 RGL2O15211 777 aa16.16■□□□□ 0.18
MRPS28-201ENST00000276585 FKTNO75072 461 aa16.16■□□□□ 0.18
MRPS28-201ENST00000276585 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
MRPS28-201ENST00000276585 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
MRPS28-201ENST00000276585 A0A0C4DFX4 3053 aa16.15■□□□□ 0.18
MRPS28-201ENST00000276585 RIPK4P57078 832 aa16.15■□□□□ 0.18
MRPS28-201ENST00000276585 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
MRPS28-201ENST00000276585 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
MRPS28-201ENST00000276585 SULF1Q8IWU6 871 aa16.15■□□□□ 0.18
MRPS28-201ENST00000276585 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
MRPS28-201ENST00000276585 KIAA2012Q0VF49 1180 aa16.14■□□□□ 0.17
MRPS28-201ENST00000276585 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
MRPS28-201ENST00000276585 RTFDC1Q9BY42 306 aaPredicted RBP16.14■□□□□ 0.17
MRPS28-201ENST00000276585 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
MRPS28-201ENST00000276585 EGFRP00533 1210 aa16.13■□□□□ 0.17
MRPS28-201ENST00000276585 CCDC184Q52MB2 194 aa16.13■□□□□ 0.17
MRPS28-201ENST00000276585 NOM1Q5C9Z4 860 aaKnown RBP16.13■□□□□ 0.17
MRPS28-201ENST00000276585 DPF2Q92785 391 aa16.13■□□□□ 0.17
MRPS28-201ENST00000276585 CDCA5Q96FF9 252 aa16.13■□□□□ 0.17
MRPS28-201ENST00000276585 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
MRPS28-201ENST00000276585 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
MRPS28-201ENST00000276585 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
MRPS28-201ENST00000276585 MPNDQ8N594 471 aa16.12■□□□□ 0.17
MRPS28-201ENST00000276585 RUNDC1Q96C34 613 aa16.12■□□□□ 0.17
MRPS28-201ENST00000276585 GGA3Q9NZ52 723 aa16.12■□□□□ 0.17
MRPS28-201ENST00000276585 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
MRPS28-201ENST00000276585 CEP290O15078 2479 aa16.11■□□□□ 0.17
MRPS28-201ENST00000276585 KIAA0100Q14667 2235 aaKnown RBP16.11■□□□□ 0.17
MRPS28-201ENST00000276585 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
MRPS28-201ENST00000276585 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
MRPS28-201ENST00000276585 ANKRD36CQ5JPF3 1778 aa16.1■□□□□ 0.17
MRPS28-201ENST00000276585 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
MRPS28-201ENST00000276585 PSMD14O00487 310 aa16.1■□□□□ 0.17
MRPS28-201ENST00000276585 GPTP24298 496 aa16.1■□□□□ 0.17
MRPS28-201ENST00000276585 PAPPA2Q9BXP8 1791 aa16.1■□□□□ 0.17
MRPS28-201ENST00000276585 FKBP1BP68106 108 aa16.09■□□□□ 0.17
MRPS28-201ENST00000276585 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
MRPS28-201ENST00000276585 MKRN3Q13064 507 aaKnown RBP16.09■□□□□ 0.17
MRPS28-201ENST00000276585 KIF4BQ2VIQ3 1234 aa16.09■□□□□ 0.17
MRPS28-201ENST00000276585 C3orf67Q6ZVT6 689 aa16.09■□□□□ 0.17
MRPS28-201ENST00000276585 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
MRPS28-201ENST00000276585 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
MRPS28-201ENST00000276585 HTTP42858 3142 aa16.09■□□□□ 0.17
MRPS28-201ENST00000276585 H0YGN5 161 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 TM4SF4P48230 202 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 NEUROD2Q15784 382 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 LRP10Q7Z4F1 713 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 ABCC4O15439 1325 aa16.08■□□□□ 0.16
MRPS28-201ENST00000276585 RPS12P25398 132 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms