RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 BOLA2Q9H3K6 86 aa16.29■□□□□ 0.2
NXPE3-201ENST00000273347 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
NXPE3-201ENST00000273347 WDR33Q9C0J8 1336 aaKnown RBP16.29■□□□□ 0.2
NXPE3-201ENST00000273347 DIAPH3Q9NSV4 1193 aa16.29■□□□□ 0.2
NXPE3-201ENST00000273347 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
NXPE3-201ENST00000273347 OS9Q13438 667 aaPredicted RBP16.28■□□□□ 0.2
NXPE3-201ENST00000273347 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
NXPE3-201ENST00000273347 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
NXPE3-201ENST00000273347 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
NXPE3-201ENST00000273347 COL22A1Q8NFW1 1626 aaPredicted RBP16.28■□□□□ 0.2
NXPE3-201ENST00000273347 DISP2A7MBM2 1401 aa16.28■□□□□ 0.2
NXPE3-201ENST00000273347 CICQ96RK0 1608 aaPredicted RBP16.28■□□□□ 0.2
NXPE3-201ENST00000273347 STX6O43752 255 aa16.27■□□□□ 0.2
NXPE3-201ENST00000273347 F13A1P00488 732 aa16.27■□□□□ 0.2
NXPE3-201ENST00000273347 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.2
NXPE3-201ENST00000273347 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
NXPE3-201ENST00000273347 C4AP0C0L4 1744 aa16.27■□□□□ 0.2
NXPE3-201ENST00000273347 C4BP0C0L5 1744 aa16.27■□□□□ 0.2
NXPE3-201ENST00000273347 ATP5J2-PTCD1G3V325 749 aa16.27■□□□□ 0.2
NXPE3-201ENST00000273347 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.2
NXPE3-201ENST00000273347 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
NXPE3-201ENST00000273347 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
NXPE3-201ENST00000273347 MBD3O95983 291 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 HAUS7Q99871 368 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 PHLPP1O60346 1717 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 A0A1B0GUL6 1792 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 DBNDD2Q9BQY9 259 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 PCDH11XQ9BZA7 1347 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 PCDH11YQ9BZA8 1340 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 GJB2P29033 226 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
NXPE3-201ENST00000273347 FOXP2O15409 715 aa16.25■□□□□ 0.19
NXPE3-201ENST00000273347 SLFNL1Q499Z3 407 aa16.25■□□□□ 0.19
NXPE3-201ENST00000273347 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
NXPE3-201ENST00000273347 SEC62Q99442 399 aaKnown RBP16.25■□□□□ 0.19
NXPE3-201ENST00000273347 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
NXPE3-201ENST00000273347 HSPA2P54652 639 aa16.25■□□□□ 0.19
NXPE3-201ENST00000273347 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
NXPE3-201ENST00000273347 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
NXPE3-201ENST00000273347 NRAPQ86VF7 1730 aa16.24■□□□□ 0.19
NXPE3-201ENST00000273347 NECAB1Q8N987 351 aa16.24■□□□□ 0.19
NXPE3-201ENST00000273347 DOT1LQ8TEK3 1739 aa16.24■□□□□ 0.19
NXPE3-201ENST00000273347 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
NXPE3-201ENST00000273347 RIC1Q4ADV7 1423 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 A0A087WZG4 1122 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 A0A0G2JLW4 131 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 HIP1O00291 1037 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 CABP4P57796 275 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 SH3TC1Q8TE82 1336 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 SH2B1Q9NRF2 756 aaPredicted RBP16.23■□□□□ 0.19
NXPE3-201ENST00000273347 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 COL14A1Q05707 1796 aaKnown RBP16.23■□□□□ 0.19
NXPE3-201ENST00000273347 A1BGP04217 495 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 CCDC129Q6ZRS4 1044 aa16.23■□□□□ 0.19
NXPE3-201ENST00000273347 LAMB2P55268 1798 aa16.22■□□□□ 0.19
NXPE3-201ENST00000273347 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
NXPE3-201ENST00000273347 COL4A1P02462 1669 aa16.22■□□□□ 0.19
NXPE3-201ENST00000273347 NCLP19338 710 aaKnown RBP16.22■□□□□ 0.19
NXPE3-201ENST00000273347 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
NXPE3-201ENST00000273347 HS1BP3Q53T59 392 aa16.22■□□□□ 0.19
NXPE3-201ENST00000273347 LMBR1LQ6UX01 489 aa16.22■□□□□ 0.19
NXPE3-201ENST00000273347 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
NXPE3-201ENST00000273347 ISCA1Q9BUE6 129 aa16.22■□□□□ 0.19
NXPE3-201ENST00000273347 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
NXPE3-201ENST00000273347 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.22■□□□□ 0.19
NXPE3-201ENST00000273347 CDC37L1Q7L3B6 337 aa16.21■□□□□ 0.19
NXPE3-201ENST00000273347 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
NXPE3-201ENST00000273347 ZCRB1Q8TBF4 217 aaKnown RBP16.21■□□□□ 0.19
NXPE3-201ENST00000273347 TCEANC2Q96MN5 208 aa16.21■□□□□ 0.19
NXPE3-201ENST00000273347 CYP21A2P08686 494 aa16.21■□□□□ 0.19
NXPE3-201ENST00000273347 ZSCAN31Q96LW9 406 aaPredicted RBP16.21■□□□□ 0.19
NXPE3-201ENST00000273347 FSD1Q9BTV5 496 aa16.21■□□□□ 0.18
NXPE3-201ENST00000273347 LRRC24Q50LG9 513 aa16.2■□□□□ 0.18
NXPE3-201ENST00000273347 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
NXPE3-201ENST00000273347 CSB-PGBD3P0DP91 1061 aa16.2■□□□□ 0.18
NXPE3-201ENST00000273347 DNM1Q05193 864 aaKnown RBP16.2■□□□□ 0.18
NXPE3-201ENST00000273347 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
NXPE3-201ENST00000273347 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
NXPE3-201ENST00000273347 AP5Z1O43299 807 aa16.19■□□□□ 0.18
NXPE3-201ENST00000273347 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
NXPE3-201ENST00000273347 UBE2HP62256 183 aa16.18■□□□□ 0.18
NXPE3-201ENST00000273347 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
NXPE3-201ENST00000273347 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
NXPE3-201ENST00000273347 KBTBD3Q8NAB2 608 aa16.18■□□□□ 0.18
NXPE3-201ENST00000273347 HMG20BQ9P0W2 317 aa16.18■□□□□ 0.18
NXPE3-201ENST00000273347 SALL1Q9NSC2 1324 aa16.18■□□□□ 0.18
NXPE3-201ENST00000273347 PUS3Q9BZE2 481 aaKnown RBP16.18■□□□□ 0.18
NXPE3-201ENST00000273347 BCORQ6W2J9 1755 aa16.17■□□□□ 0.18
NXPE3-201ENST00000273347 TTC6Q86TZ1 520 aa16.17■□□□□ 0.18
NXPE3-201ENST00000273347 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
NXPE3-201ENST00000273347 ZNF335Q9H4Z2 1342 aaPredicted RBP16.17■□□□□ 0.18
NXPE3-201ENST00000273347 ROBO1Q9Y6N7 1651 aa16.17■□□□□ 0.18
NXPE3-201ENST00000273347 CTDNEP1O95476 244 aa16.17■□□□□ 0.18
NXPE3-201ENST00000273347 ZNF500O60304 480 aaPredicted RBP16.17■□□□□ 0.18
NXPE3-201ENST00000273347 CHD4Q14839 1912 aa16.17■□□□□ 0.18
NXPE3-201ENST00000273347 CIAO1O76071 339 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms