RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 ZDHHC9Q9Y397 364 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 COL15A1P39059 1388 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
CPNE9-201ENST00000273027 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 MSNP26038 577 aaKnown RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
CPNE9-201ENST00000273027 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 DDX21Q9NR30 783 aaKnown RBP eCLIP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
CPNE9-201ENST00000273027 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
CPNE9-201ENST00000273027 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
CPNE9-201ENST00000273027 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
CPNE9-201ENST00000273027 RFX7Q2KHR2 1363 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 PSMA5P28066 241 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 HTRA3P83110 453 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 VPS53Q5VIR6 699 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 MPRIPQ6WCQ1 1025 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 AK7Q96M32 723 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 DIAPH3Q9NSV4 1193 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
CPNE9-201ENST00000273027 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 TPM2P07951 284 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
CPNE9-201ENST00000273027 ZKSCAN1P17029 563 aaPredicted RBP12.09□□□□□ -0.47
CPNE9-201ENST00000273027 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
CPNE9-201ENST00000273027 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
CPNE9-201ENST00000273027 ANKRD1Q15327 319 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
CPNE9-201ENST00000273027 ARHGAP27Q6ZUM4 889 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 TTC14Q96N46 770 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 LSG1Q9H089 658 aaKnown RBP12.09□□□□□ -0.47
CPNE9-201ENST00000273027 NMRK2Q9NPI5 230 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 C5P01031 1676 aa12.09□□□□□ -0.47
CPNE9-201ENST00000273027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
CPNE9-201ENST00000273027 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
CPNE9-201ENST00000273027 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
CPNE9-201ENST00000273027 AMIGO3Q86WK7 504 aa12.08□□□□□ -0.48
CPNE9-201ENST00000273027 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
CPNE9-201ENST00000273027 LGR6Q9HBX8 967 aa12.08□□□□□ -0.48
CPNE9-201ENST00000273027 CCDC39Q9UFE4 941 aa12.08□□□□□ -0.48
CPNE9-201ENST00000273027 SNX14Q9Y5W7 946 aa12.08□□□□□ -0.48
CPNE9-201ENST00000273027 MRC1P22897 1456 aa12.08□□□□□ -0.48
CPNE9-201ENST00000273027 ITGB4P16144 1822 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 GRM8O00222 908 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
CPNE9-201ENST00000273027 PDCP20941 246 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPNE9-201ENST00000273027 PKD1L3Q7Z443 1732 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 USHBP1Q8N6Y0 703 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 GPT2Q8TD30 523 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 NECTIN2Q92692 538 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 KLRG1Q96E93 195 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 TSPY26PQ9H489 355 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 HMG20BQ9P0W2 317 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
CPNE9-201ENST00000273027 MEGF6O75095 1541 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 PALLDQ8WX93 1383 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 A0A0G2JLW4 131 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 ZSCAN22P10073 491 aaPredicted RBP12.06□□□□□ -0.48
CPNE9-201ENST00000273027 TSGA10IPQ3SY00 556 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 PALD1Q9ULE6 856 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 NOL7Q9UMY1 257 aaKnown RBP12.06□□□□□ -0.48
CPNE9-201ENST00000273027 SMC3Q9UQE7 1217 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 MAP3K2Q9Y2U5 619 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 CCDC171Q6TFL3 1326 aa12.06□□□□□ -0.48
CPNE9-201ENST00000273027 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
CPNE9-201ENST00000273027 TATP17735 454 aaPredicted RBP12.05□□□□□ -0.48
CPNE9-201ENST00000273027 PRELPP51888 382 aa12.05□□□□□ -0.48
CPNE9-201ENST00000273027 UBE2HP62256 183 aa12.05□□□□□ -0.48
CPNE9-201ENST00000273027 PKP1Q13835 747 aa12.05□□□□□ -0.48
CPNE9-201ENST00000273027 KRT32Q14532 448 aa12.05□□□□□ -0.48
CPNE9-201ENST00000273027 JMYQ8N9B5 988 aa12.05□□□□□ -0.48
CPNE9-201ENST00000273027 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
CPNE9-201ENST00000273027 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
CPNE9-201ENST00000273027 TOGARAM1Q9Y4F4 1720 aa12.04□□□□□ -0.48
CPNE9-201ENST00000273027 STX6O43752 255 aa12.04□□□□□ -0.48
CPNE9-201ENST00000273027 OFD1O75665 1012 aa12.04□□□□□ -0.48
CPNE9-201ENST00000273027 NECTIN1Q15223 517 aa12.04□□□□□ -0.48
CPNE9-201ENST00000273027 CCDC183Q5T5S1 534 aa12.04□□□□□ -0.48
CPNE9-201ENST00000273027 MAP4K1Q92918 833 aa12.04□□□□□ -0.48
CPNE9-201ENST00000273027 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
CPNE9-201ENST00000273027 RPAP1Q9BWH6 1393 aaPredicted RBP12.04□□□□□ -0.48
CPNE9-201ENST00000273027 TPM3P06753 285 aa12.03□□□□□ -0.48
CPNE9-201ENST00000273027 MMP10P09238 476 aa12.03□□□□□ -0.48
CPNE9-201ENST00000273027 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
CPNE9-201ENST00000273027 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
CPNE9-201ENST00000273027 RBSNQ9H1K0 784 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms