RNA–Protein interactions for RNA: ENST00000269740.8

SLC39A3-201, Transcript of solute carrier family 39 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A3, Length 1,502 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-201ENST00000269740 C1orf115Q9H7X2 142 aa29.81■■■□□ 2.36
SLC39A3-201ENST00000269740 RPAP2Q8IXW5 612 aaPredicted RBP29.81■■■□□ 2.36
SLC39A3-201ENST00000269740 CD2APQ9Y5K6 639 aa29.8■■■□□ 2.36
SLC39A3-201ENST00000269740 RTL9Q8NET4 1388 aa29.79■■■□□ 2.36
SLC39A3-201ENST00000269740 ERICH6BQ5W0A0 696 aa29.79■■■□□ 2.36
SLC39A3-201ENST00000269740 C3orf67Q6ZVT6 689 aa29.79■■■□□ 2.36
SLC39A3-201ENST00000269740 ATP8B2P98198 1209 aa29.77■■■□□ 2.36
SLC39A3-201ENST00000269740 CEP85Q6P2H3 762 aa29.77■■■□□ 2.36
SLC39A3-201ENST00000269740 TGFB2P61812 414 aa29.76■■■□□ 2.36
SLC39A3-201ENST00000269740 H0YIN7 160 aa29.76■■■□□ 2.35
SLC39A3-201ENST00000269740 SRGNP10124 158 aa29.76■■■□□ 2.35
SLC39A3-201ENST00000269740 HOXA10P31260 410 aaPredicted RBP29.76■■■□□ 2.35
SLC39A3-201ENST00000269740 RPGRQ92834 1020 aaKnown RBP29.75■■■□□ 2.35
SLC39A3-201ENST00000269740 GREM2Q9H772 168 aa29.75■■■□□ 2.35
SLC39A3-201ENST00000269740 CHMP3Q9Y3E7 222 aa29.75■■■□□ 2.35
SLC39A3-201ENST00000269740 SRGAP3O43295 1099 aa29.74■■■□□ 2.35
SLC39A3-201ENST00000269740 NPR1P16066 1061 aa29.74■■■□□ 2.35
SLC39A3-201ENST00000269740 IFIT5Q13325 482 aaKnown RBP29.74■■■□□ 2.35
SLC39A3-201ENST00000269740 CCDC57Q2TAC2 916 aa29.74■■■□□ 2.35
SLC39A3-201ENST00000269740 PCDHB15Q9Y5E8 787 aa29.74■■■□□ 2.35
SLC39A3-201ENST00000269740 COL11A2P13942 1736 aaPredicted RBP29.74■■■□□ 2.35
SLC39A3-201ENST00000269740 FAM161AQ3B820 660 aa29.73■■■□□ 2.35
SLC39A3-201ENST00000269740 DDX46Q7L014 1031 aaKnown RBP29.73■■■□□ 2.35
SLC39A3-201ENST00000269740 C2CD5Q86YS7 1000 aa29.73■■■□□ 2.35
SLC39A3-201ENST00000269740 MASTLQ96GX5 879 aa29.73■■■□□ 2.35
SLC39A3-201ENST00000269740 LRP5O75197 1615 aa29.73■■■□□ 2.35
SLC39A3-201ENST00000269740 DLEC1Q9Y238 1755 aa29.73■■■□□ 2.35
SLC39A3-201ENST00000269740 ITGA6P23229 1130 aa29.72■■■□□ 2.35
SLC39A3-201ENST00000269740 SSH3Q8TE77 659 aa29.72■■■□□ 2.35
SLC39A3-201ENST00000269740 RBM17Q96I25 401 aaKnown RBP29.72■■■□□ 2.35
SLC39A3-201ENST00000269740 CCDC85AQ96PX6 553 aaPredicted RBP29.72■■■□□ 2.35
SLC39A3-201ENST00000269740 PNMA6EA0A0J9YXQ4 647 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 ANKRD18BA2A2Z9 1011 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 HMMRO75330 724 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 CRAMP1Q96RY5 1269 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 POLA2Q14181 598 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 STYK1Q6J9G0 422 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 SIRT2Q8IXJ6 389 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 KIAA1551Q9HCM1 1747 aa29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 PPP1R1BQ9UD71 204 aaPredicted RBP29.71■■■□□ 2.35
SLC39A3-201ENST00000269740 CDC5LQ99459 802 aaKnown RBP29.7■■■□□ 2.34
SLC39A3-201ENST00000269740 TAF1P21675 1872 aa29.69■■■□□ 2.34
SLC39A3-201ENST00000269740 ALDH1B1P30837 517 aa29.69■■■□□ 2.34
SLC39A3-201ENST00000269740 RFX5P48382 616 aaPredicted RBP29.68■■■□□ 2.34
SLC39A3-201ENST00000269740 SEC31BQ9NQW1 1179 aa29.68■■■□□ 2.34
SLC39A3-201ENST00000269740 CHRNA5P30532 468 aa29.67■■■□□ 2.34
SLC39A3-201ENST00000269740 KLHL34Q8N239 644 aa29.67■■■□□ 2.34
SLC39A3-201ENST00000269740 COPRSQ9NQ92 184 aa29.67■■■□□ 2.34
SLC39A3-201ENST00000269740 GRAPQ13588 217 aa29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 GRAPLQ8TC17 118 aaPredicted RBP29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 CNKSR1Q969H4 720 aa29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 DPEP1P16444 411 aa29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 RPS8P62241 208 aaKnown RBP29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 HDAC1Q13547 482 aaPredicted RBP29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 TAF7LQ5H9L4 462 aa29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 ZNF622Q969S3 477 aaKnown RBP eCLIP29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 FHDC1Q9C0D6 1143 aaPredicted RBP29.66■■■□□ 2.34
SLC39A3-201ENST00000269740 A0A0G2JLW4 131 aa29.65■■■□□ 2.34
SLC39A3-201ENST00000269740 BBOX1O75936 387 aa29.65■■■□□ 2.34
SLC39A3-201ENST00000269740 PTPN12Q05209 780 aaKnown RBP29.65■■■□□ 2.34
SLC39A3-201ENST00000269740 ANKRD18AQ8IVF6 992 aa29.65■■■□□ 2.34
SLC39A3-201ENST00000269740 FBXO3Q9UK99 471 aa29.65■■■□□ 2.34
SLC39A3-201ENST00000269740 KCNA3P22001 575 aa29.64■■■□□ 2.34
SLC39A3-201ENST00000269740 IGHMBP2P38935 993 aaKnown RBP29.64■■■□□ 2.34
SLC39A3-201ENST00000269740 BRCA1P38398 1863 aaKnown RBP29.64■■■□□ 2.33
SLC39A3-201ENST00000269740 TMC4Q7Z404 712 aa29.63■■■□□ 2.33
SLC39A3-201ENST00000269740 CELF1Q92879 486 aaKnown RBP29.63■■■□□ 2.33
SLC39A3-201ENST00000269740 RWDD1Q9H446 243 aaPredicted RBP29.63■■■□□ 2.33
SLC39A3-201ENST00000269740 MPHOSPH8Q99549 860 aa29.62■■■□□ 2.33
SLC39A3-201ENST00000269740 SPEF2Q9C093 1822 aa29.62■■■□□ 2.33
SLC39A3-201ENST00000269740 CACNA1SQ13698 1873 aa29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 BSDC1Q9NW68 430 aaPredicted RBP29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 PIM2Q9P1W9 311 aa29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 NOP58Q9Y2X3 529 aaKnown RBP29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 LDHAL6AQ6ZMR3 332 aa29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 KLHDC4Q8TBB5 520 aa29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 ZNF594Q96JF6 807 aaPredicted RBP29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 SYT17Q9BSW7 474 aa29.61■■■□□ 2.33
SLC39A3-201ENST00000269740 TTLL6Q8N841 843 aa29.6■■■□□ 2.33
SLC39A3-201ENST00000269740 COL4A1P02462 1669 aa29.59■■■□□ 2.33
SLC39A3-201ENST00000269740 SLX4Q8IY92 1834 aa29.59■■■□□ 2.33
SLC39A3-201ENST00000269740 CIAO1O76071 339 aa29.59■■■□□ 2.33
SLC39A3-201ENST00000269740 PA2G4Q9UQ80 394 aaKnown RBP29.59■■■□□ 2.33
SLC39A3-201ENST00000269740 EYA2O00167 538 aa29.58■■■□□ 2.33
SLC39A3-201ENST00000269740 SURF6O75683 361 aaKnown RBP29.58■■■□□ 2.33
SLC39A3-201ENST00000269740 HSP90AB4PQ58FF6 505 aa29.58■■■□□ 2.33
SLC39A3-201ENST00000269740 NLGN2Q8NFZ4 835 aa29.58■■■□□ 2.33
SLC39A3-201ENST00000269740 PRPF40BQ6NWY9 871 aaKnown RBP29.57■■■□□ 2.32
SLC39A3-201ENST00000269740 DCTPP1Q9H773 170 aa29.57■■■□□ 2.32
SLC39A3-201ENST00000269740 CNNM1Q9NRU3 951 aa29.57■■■□□ 2.32
SLC39A3-201ENST00000269740 PPP4R2Q9NY27 417 aa29.57■■■□□ 2.32
SLC39A3-201ENST00000269740 PPEF1O14829 653 aaPredicted RBP29.55■■■□□ 2.32
SLC39A3-201ENST00000269740 IL15P40933 162 aaPredicted RBP29.55■■■□□ 2.32
SLC39A3-201ENST00000269740 G3BP1Q13283 466 aaKnown RBP eCLIP29.55■■■□□ 2.32
SLC39A3-201ENST00000269740 RIPOR2Q9Y4F9 1068 aa29.55■■■□□ 2.32
SLC39A3-201ENST00000269740 SP8Q8IXZ3 490 aa29.55■■■□□ 2.32
SLC39A3-201ENST00000269740 PUS3Q9BZE2 481 aaKnown RBP29.55■■■□□ 2.32
SLC39A3-201ENST00000269740 SIL1Q9H173 461 aa29.55■■■□□ 2.32
SLC39A3-201ENST00000269740 LRRC37AA6NMS7 1700 aa29.54■■■□□ 2.32
SLC39A3-201ENST00000269740 IGHDP01880 384 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms