RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 COL15A1P39059 1388 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 MED23Q9ULK4 1368 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 LMO7Q8WWI1 1683 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 CEBPZQ03701 1054 aaKnown RBP20.21■□□□□ 0.83
SPG7-201ENST00000268704 CCDC129Q6ZRS4 1044 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 BICD2Q8TD16 824 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 C16orf45Q96MC5 204 aaPredicted RBP20.21■□□□□ 0.83
SPG7-201ENST00000268704 LRRC2Q9BYS8 371 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 SLIT1O75093 1534 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 NFAT5O94916 1531 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 SPDYE4A6NLX3 237 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 PDCP20941 246 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 TRIM5Q9C035 493 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 ARHGAP23Q9P227 1491 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 PLEKHO1Q53GL0 409 aaPredicted RBP20.2■□□□□ 0.82
SPG7-201ENST00000268704 EPHA10Q5JZY3 1008 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 RNF20Q5VTR2 975 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 LINS1Q8NG48 757 aa20.2■□□□□ 0.82
SPG7-201ENST00000268704 USP54Q70EL1 1684 aa20.19■□□□□ 0.82
SPG7-201ENST00000268704 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
SPG7-201ENST00000268704 MYL6BP14649 208 aa20.19■□□□□ 0.82
SPG7-201ENST00000268704 CHAF1AQ13111 956 aaPredicted RBP20.19■□□□□ 0.82
SPG7-201ENST00000268704 PPFIA3O75145 1194 aa20.19■□□□□ 0.82
SPG7-201ENST00000268704 SEC62Q99442 399 aaKnown RBP20.19■□□□□ 0.82
SPG7-201ENST00000268704 SCAND2PQ9GZW5 306 aaPredicted RBP20.19■□□□□ 0.82
SPG7-201ENST00000268704 HIP1O00291 1037 aa20.18■□□□□ 0.82
SPG7-201ENST00000268704 CCDC9Q9Y3X0 531 aaKnown RBP20.18■□□□□ 0.82
SPG7-201ENST00000268704 NPHP3Q7Z494 1330 aa20.18■□□□□ 0.82
SPG7-201ENST00000268704 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
SPG7-201ENST00000268704 BRF1Q92994 677 aa20.18■□□□□ 0.82
SPG7-201ENST00000268704 A0A087WWV3 80 aa20.18■□□□□ 0.82
SPG7-201ENST00000268704 TAF5LO75529 589 aa20.18■□□□□ 0.82
SPG7-201ENST00000268704 SLC39A6Q13433 755 aa20.18■□□□□ 0.82
SPG7-201ENST00000268704 CLSTN2Q9H4D0 955 aa20.18■□□□□ 0.82
SPG7-201ENST00000268704 ANKRD1Q15327 319 aa20.17■□□□□ 0.82
SPG7-201ENST00000268704 FTOQ9C0B1 505 aaKnown RBP eCLIP20.17■□□□□ 0.82
SPG7-201ENST00000268704 TPM3P06753 285 aa20.17■□□□□ 0.82
SPG7-201ENST00000268704 PDCL2Q8N4E4 241 aa20.17■□□□□ 0.82
SPG7-201ENST00000268704 SNRKQ9NRH2 765 aa20.17■□□□□ 0.82
SPG7-201ENST00000268704 ZNF165P49910 485 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 ZNF75DP51815 510 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 RIC3Q7Z5B4 369 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 HSP90B1P14625 803 aaKnown RBP20.16■□□□□ 0.82
SPG7-201ENST00000268704 U2AF2P26368 475 aaKnown RBP eCLIP20.16■□□□□ 0.829e-9■■□□□ 13.3
SPG7-201ENST00000268704 PSME1Q06323 249 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 PDIA6Q15084 440 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 ESCO1Q5FWF5 840 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 ZSCAN20P17040 1043 aaPredicted RBP20.16■□□□□ 0.82
SPG7-201ENST00000268704 CCDC144BQ3MJ40 725 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 CCDC144CPQ8IYA2 1237 aa20.16■□□□□ 0.82
SPG7-201ENST00000268704 DDX19AQ9NUU7 478 aaKnown RBP20.16■□□□□ 0.82
SPG7-201ENST00000268704 ZSCAN25Q6NSZ9 544 aa20.15■□□□□ 0.82
SPG7-201ENST00000268704 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
SPG7-201ENST00000268704 PLA2G4DQ86XP0 818 aa20.15■□□□□ 0.82
SPG7-201ENST00000268704 DBNLQ9UJU6 430 aaKnown RBP20.15■□□□□ 0.82
SPG7-201ENST00000268704 SLFNL1Q499Z3 407 aa20.15■□□□□ 0.82
SPG7-201ENST00000268704 Q6ZUG5 572 aa20.15■□□□□ 0.82
SPG7-201ENST00000268704 GTF3C6Q969F1 213 aa20.15■□□□□ 0.82
SPG7-201ENST00000268704 DNAJC2Q99543 621 aaKnown RBP20.15■□□□□ 0.82
SPG7-201ENST00000268704 HEG1Q9ULI3 1381 aa20.14■□□□□ 0.81
SPG7-201ENST00000268704 RESTQ13127 1097 aa20.14■□□□□ 0.81
SPG7-201ENST00000268704 NAA30Q147X3 362 aaPredicted RBP20.14■□□□□ 0.81
SPG7-201ENST00000268704 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
SPG7-201ENST00000268704 UTYO14607 1347 aa20.14■□□□□ 0.81
SPG7-201ENST00000268704 ARID5BQ14865 1188 aa20.13■□□□□ 0.81
SPG7-201ENST00000268704 RBM43Q6ZSC3 357 aaKnown RBP20.13■□□□□ 0.81
SPG7-201ENST00000268704 CACTINQ8WUQ7 758 aaKnown RBP20.13■□□□□ 0.81
SPG7-201ENST00000268704 DDX21Q9NR30 783 aaKnown RBP eCLIP20.13■□□□□ 0.81
SPG7-201ENST00000268704 H3BQV1 296 aa20.13■□□□□ 0.81
SPG7-201ENST00000268704 IFFO2Q5TF58 517 aa20.13■□□□□ 0.81
SPG7-201ENST00000268704 NEK1Q96PY6 1258 aa20.13■□□□□ 0.81
SPG7-201ENST00000268704 MYD88Q99836 296 aa20.13■□□□□ 0.81
SPG7-201ENST00000268704 CLIP2Q9UDT6 1046 aa20.13■□□□□ 0.81
SPG7-201ENST00000268704 DDX58O95786 925 aaKnown RBP20.13■□□□□ 0.81
SPG7-201ENST00000268704 TDRD7Q8NHU6 1098 aaKnown RBP20.13■□□□□ 0.81
SPG7-201ENST00000268704 ZNF609O15014 1411 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 NEURL1BA8MQ27 555 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 TFCP2Q12800 502 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 C11orf57Q6ZUT1 292 aaPredicted RBP20.12■□□□□ 0.81
SPG7-201ENST00000268704 JCADQ9P266 1359 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 CYP21A2P08686 494 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 AMOTQ4VCS5 1084 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 ANKRD7Q92527 254 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 HMG20BQ9P0W2 317 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 HDAC5Q9UQL6 1122 aa20.12■□□□□ 0.81
SPG7-201ENST00000268704 CTIFO43310 598 aaKnown RBP20.11■□□□□ 0.81
SPG7-201ENST00000268704 SCRN1Q12765 414 aa20.11■□□□□ 0.81
SPG7-201ENST00000268704 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
SPG7-201ENST00000268704 XAGE3Q8WTP9 111 aa20.11■□□□□ 0.81
SPG7-201ENST00000268704 ERCC4Q92889 916 aaPredicted RBP20.11■□□□□ 0.81
SPG7-201ENST00000268704 KLHL34Q8N239 644 aa20.11■□□□□ 0.81
SPG7-201ENST00000268704 AXIN2Q9Y2T1 843 aa20.11■□□□□ 0.81
SPG7-201ENST00000268704 ADGRL3Q9HAR2 1447 aa20.11■□□□□ 0.81
SPG7-201ENST00000268704 NCBP1Q09161 790 aaKnown RBP20.11■□□□□ 0.81
SPG7-201ENST00000268704 GCKRQ14397 625 aa20.11■□□□□ 0.81
SPG7-201ENST00000268704 FBXW7Q969H0 707 aa20.11■□□□□ 0.81
SPG7-201ENST00000268704 TNNT1P13805 278 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms