RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 ADGRL2O95490 1459 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 TERF2Q15554 542 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 RPGRIP1Q96KN7 1286 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 DISP3Q9P2K9 1392 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 ACTN2P35609 894 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 MAGEA9P43362 315 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 VAV2P52735 878 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 HLTFQ14527 1009 aaKnown RBP eCLIP12.23□□□□□ -0.45
CPT1A-201ENST00000265641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.23□□□□□ -0.455e-8■■■■■ 35.9
CPT1A-201ENST00000265641 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
CPT1A-201ENST00000265641 MEX3CQ5U5Q3 659 aaKnown RBP12.23□□□□□ -0.45
CPT1A-201ENST00000265641 CACNA2D3Q8IZS8 1091 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 GOLGA6CA6NDK9 693 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 GOLGA6DP0CG33 693 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 WHAMMP3Q1A5X7 153 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 CEP85LQ5SZL2 805 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 CDK5RAP3Q96JB5 506 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 GOLGA6AQ9NYA3 693 aa12.23□□□□□ -0.45
CPT1A-201ENST00000265641 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 CNNM3Q8NE01 707 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 TMX1Q9H3N1 280 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 CCDC40Q4G0X9 1142 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 VPS53Q5VIR6 699 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 MMS22LQ6ZRQ5 1243 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
CPT1A-201ENST00000265641 STAMBPO95630 424 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 CHMP4BP1P59074 171 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 CEP63Q96MT8 703 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 DNAJC25Q9H1X3 360 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 DACT1Q9NYF0 836 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 MRPS27Q92552 414 aaKnown RBP12.22□□□□□ -0.45
CPT1A-201ENST00000265641 ATP10BO94823 1461 aa12.22□□□□□ -0.45
CPT1A-201ENST00000265641 FAM177BA6PVY3 158 aa12.21□□□□□ -0.45
CPT1A-201ENST00000265641 TACC1O75410 805 aa12.21□□□□□ -0.45
CPT1A-201ENST00000265641 KIF4AO95239 1232 aa12.21□□□□□ -0.45
CPT1A-201ENST00000265641 KRT86O43790 486 aa12.21□□□□□ -0.45
CPT1A-201ENST00000265641 SLMAPQ14BN4 828 aa12.21□□□□□ -0.45
CPT1A-201ENST00000265641 CCDC102BQ68D86 513 aa12.21□□□□□ -0.45
CPT1A-201ENST00000265641 STIM2Q9P246 746 aa12.21□□□□□ -0.45
CPT1A-201ENST00000265641 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
CPT1A-201ENST00000265641 CETN2P41208 172 aa12.21□□□□□ -0.46
CPT1A-201ENST00000265641 ZSCAN25Q6NSZ9 544 aa12.21□□□□□ -0.46
CPT1A-201ENST00000265641 PTPRCP08575 1304 aa12.21□□□□□ -0.46
CPT1A-201ENST00000265641 SEPT14Q6ZU15 432 aa12.21□□□□□ -0.46
CPT1A-201ENST00000265641 C8orf76Q96K31 380 aa12.21□□□□□ -0.46
CPT1A-201ENST00000265641 NCAPGQ9BPX3 1015 aa12.21□□□□□ -0.46
CPT1A-201ENST00000265641 JADE2Q9NQC1 790 aa12.21□□□□□ -0.46
CPT1A-201ENST00000265641 TTF2Q9UNY4 1162 aaKnown RBP12.21□□□□□ -0.46
CPT1A-201ENST00000265641 CFAP58Q5T655 872 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 ZGPATQ8N5A5 531 aaKnown RBP12.2□□□□□ -0.46
CPT1A-201ENST00000265641 CCDC113Q9H0I3 377 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 NSD2O96028 1365 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 ZSWIM4Q9H7M6 989 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 CDC25BP30305 580 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 ADGBQ8N7X0 1667 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 CFAP57Q96MR6 1250 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 TSGA10Q9BZW7 698 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPT1A-201ENST00000265641 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
CPT1A-201ENST00000265641 CCDC178Q5BJE1 867 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 FAM184BQ9ULE4 1060 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 GOLGA8KD6RF30 607 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 CABS1Q96KC9 395 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 ANKRD62A6NC57 917 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 PCK1P35558 622 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 SETDB1Q15047 1291 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
CPT1A-201ENST00000265641 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
CPT1A-201ENST00000265641 ZMYM4Q5VZL5 1548 aa12.19□□□□□ -0.46
CPT1A-201ENST00000265641 ARHGAP6O43182 974 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 TRIM14Q14142 442 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 ZNF365Q70YC5 407 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 CNGA4Q8IV77 575 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 DUOX2Q9NRD8 1548 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 ARHGEF12Q9NZN5 1544 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 ARID4AP29374 1257 aaPredicted RBP12.18□□□□□ -0.46
CPT1A-201ENST00000265641 SNCBQ16143 134 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 NAPGQ99747 312 aaPredicted RBP12.18□□□□□ -0.46
CPT1A-201ENST00000265641 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 SELENOOQ9BVL4 669 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 GEMIN8Q9NWZ8 242 aaKnown RBP12.18□□□□□ -0.46
CPT1A-201ENST00000265641 DDX41Q9UJV9 622 aaKnown RBP12.18□□□□□ -0.46
CPT1A-201ENST00000265641 USH1CQ9Y6N9 552 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 SIL1Q9H173 461 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 RMND1Q9NWS8 449 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
CPT1A-201ENST00000265641 APBA1Q02410 837 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
CPT1A-201ENST00000265641 ANKRD24Q8TF21 1146 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 CARD6Q9BX69 1037 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 CLSTN2Q9H4D0 955 aa12.18□□□□□ -0.46
CPT1A-201ENST00000265641 RASAL2Q9UJF2 1139 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms