RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 COL4A1P02462 1669 aa16.91■□□□□ 0.3
PDCD6-201ENST00000264933 GTF2E1P29083 439 aaPredicted RBP16.91■□□□□ 0.3
PDCD6-201ENST00000264933 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
PDCD6-201ENST00000264933 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
PDCD6-201ENST00000264933 UBE3BQ7Z3V4 1068 aa16.91■□□□□ 0.3
PDCD6-201ENST00000264933 RASSF7Q02833 373 aa16.9■□□□□ 0.3
PDCD6-201ENST00000264933 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
PDCD6-201ENST00000264933 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
PDCD6-201ENST00000264933 SUPT16HQ9Y5B9 1047 aaKnown RBP16.9■□□□□ 0.3
PDCD6-201ENST00000264933 SLX4Q8IY92 1834 aa16.89■□□□□ 0.29
PDCD6-201ENST00000264933 SBF1O95248 1867 aa16.89■□□□□ 0.29
PDCD6-201ENST00000264933 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-201ENST00000264933 PDE8AO60658 829 aa16.89■□□□□ 0.29
PDCD6-201ENST00000264933 PDE6BP35913 854 aa16.89■□□□□ 0.29
PDCD6-201ENST00000264933 FOXO4P98177 505 aa16.89■□□□□ 0.29
PDCD6-201ENST00000264933 SF3B3Q15393 1217 aaKnown RBP16.89■□□□□ 0.29
PDCD6-201ENST00000264933 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-201ENST00000264933 SUCLG2Q96I99 432 aa16.89■□□□□ 0.29
PDCD6-201ENST00000264933 MEIS3Q99687 375 aa16.89■□□□□ 0.29
PDCD6-201ENST00000264933 C9orf78Q9NZ63 289 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-201ENST00000264933 TOMM70O94826 608 aa16.88■□□□□ 0.29
PDCD6-201ENST00000264933 CSF1RP07333 972 aa16.88■□□□□ 0.29
PDCD6-201ENST00000264933 SRGNP10124 158 aa16.88■□□□□ 0.29
PDCD6-201ENST00000264933 MS4A1P11836 297 aa16.88■□□□□ 0.29
PDCD6-201ENST00000264933 C2CD5Q86YS7 1000 aa16.88■□□□□ 0.29
PDCD6-201ENST00000264933 FTSJ3Q8IY81 847 aaKnown RBP16.88■□□□□ 0.29
PDCD6-201ENST00000264933 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
PDCD6-201ENST00000264933 NPHP1O15259 732 aa16.87■□□□□ 0.29
PDCD6-201ENST00000264933 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
PDCD6-201ENST00000264933 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
PDCD6-201ENST00000264933 NFKBIEO00221 500 aa16.86■□□□□ 0.29
PDCD6-201ENST00000264933 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
PDCD6-201ENST00000264933 MVPQ14764 893 aaKnown RBP16.86■□□□□ 0.29
PDCD6-201ENST00000264933 TTLL6Q8N841 843 aa16.86■□□□□ 0.29
PDCD6-201ENST00000264933 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
PDCD6-201ENST00000264933 H0YIN7 160 aa16.85■□□□□ 0.29
PDCD6-201ENST00000264933 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
PDCD6-201ENST00000264933 ITPRIPQ8IWB1 547 aa16.85■□□□□ 0.29
PDCD6-201ENST00000264933 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
PDCD6-201ENST00000264933 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
PDCD6-201ENST00000264933 NPR1P16066 1061 aa16.84■□□□□ 0.29
PDCD6-201ENST00000264933 CTSWP56202 376 aa16.84■□□□□ 0.29
PDCD6-201ENST00000264933 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
PDCD6-201ENST00000264933 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
PDCD6-201ENST00000264933 SEC31BQ9NQW1 1179 aa16.84■□□□□ 0.29
PDCD6-201ENST00000264933 RBM46Q8TBY0 533 aaKnown RBP16.83■□□□□ 0.28
PDCD6-201ENST00000264933 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
PDCD6-201ENST00000264933 BICC1Q9H694 974 aaKnown RBP16.83■□□□□ 0.28
PDCD6-201ENST00000264933 LRRFIP2Q9Y608 721 aaKnown RBP16.83■□□□□ 0.28
PDCD6-201ENST00000264933 RTL9Q8NET4 1388 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 KDM2BQ8NHM5 1336 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 ZC3H4Q9UPT8 1303 aaKnown RBP16.82■□□□□ 0.28
PDCD6-201ENST00000264933 GNAI3P08754 354 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
PDCD6-201ENST00000264933 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
PDCD6-201ENST00000264933 LMNB1P20700 586 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 LMBR1LQ6UX01 489 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
PDCD6-201ENST00000264933 GREM2Q9H772 168 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 ZBTB40Q9NUA8 1239 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 DDX19BQ9UMR2 479 aa16.82■□□□□ 0.28
PDCD6-201ENST00000264933 APLP1P51693 650 aa16.81■□□□□ 0.28
PDCD6-201ENST00000264933 SLC51AQ86UW1 340 aa16.81■□□□□ 0.28
PDCD6-201ENST00000264933 DNAJC5GQ8N7S2 189 aa16.81■□□□□ 0.28
PDCD6-201ENST00000264933 CELF1Q92879 486 aaKnown RBP16.81■□□□□ 0.28
PDCD6-201ENST00000264933 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■□□□ 14.2
PDCD6-201ENST00000264933 RRAGCQ9HB90 399 aa16.81■□□□□ 0.28
PDCD6-201ENST00000264933 LRRC37AA6NMS7 1700 aa16.8■□□□□ 0.28
PDCD6-201ENST00000264933 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
PDCD6-201ENST00000264933 RFX5P48382 616 aaPredicted RBP16.8■□□□□ 0.28
PDCD6-201ENST00000264933 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
PDCD6-201ENST00000264933 CCDC152Q4G0S7 254 aa16.8■□□□□ 0.28
PDCD6-201ENST00000264933 C7orf43Q8WVR3 580 aa16.8■□□□□ 0.28
PDCD6-201ENST00000264933 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
PDCD6-201ENST00000264933 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
PDCD6-201ENST00000264933 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
PDCD6-201ENST00000264933 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
PDCD6-201ENST00000264933 GNAI2P04899 355 aa16.79■□□□□ 0.28
PDCD6-201ENST00000264933 ALDH1B1P30837 517 aa16.79■□□□□ 0.28
PDCD6-201ENST00000264933 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
PDCD6-201ENST00000264933 CNKSR1Q969H4 720 aa16.79■□□□□ 0.28
PDCD6-201ENST00000264933 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
PDCD6-201ENST00000264933 GLTPD2A6NH11 291 aa16.78■□□□□ 0.28
PDCD6-201ENST00000264933 C21orf2O43822 256 aa16.78■□□□□ 0.28
PDCD6-201ENST00000264933 MTX1Q13505 466 aa16.78■□□□□ 0.28
PDCD6-201ENST00000264933 GRAPQ13588 217 aa16.78■□□□□ 0.28
PDCD6-201ENST00000264933 DDX46Q7L014 1031 aaKnown RBP16.78■□□□□ 0.28
PDCD6-201ENST00000264933 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
PDCD6-201ENST00000264933 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
PDCD6-201ENST00000264933 ITGA6P23229 1130 aa16.77■□□□□ 0.28
PDCD6-201ENST00000264933 HTRA3P83110 453 aa16.77■□□□□ 0.28
PDCD6-201ENST00000264933 FSTL1Q12841 308 aa16.77■□□□□ 0.28
PDCD6-201ENST00000264933 PRPF40BQ6NWY9 871 aaKnown RBP16.77■□□□□ 0.28
PDCD6-201ENST00000264933 ZNF594Q96JF6 807 aaPredicted RBP16.77■□□□□ 0.28
PDCD6-201ENST00000264933 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
PDCD6-201ENST00000264933 CCDC88AQ3V6T2 1871 aa16.77■□□□□ 0.27
PDCD6-201ENST00000264933 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
PDCD6-201ENST00000264933 POTECB2RU33 542 aa16.76■□□□□ 0.27
PDCD6-201ENST00000264933 BBOX1O75936 387 aa16.76■□□□□ 0.27
PDCD6-201ENST00000264933 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms