RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 IL13P35225 146 aa18.86■□□□□ 0.61
GPC1-201ENST00000264039 PLA2G4DQ86XP0 818 aa18.86■□□□□ 0.61
GPC1-201ENST00000264039 SOS1Q07889 1333 aaPredicted RBP18.86■□□□□ 0.61
GPC1-201ENST00000264039 DESI2Q9BSY9 194 aa18.86■□□□□ 0.61
GPC1-201ENST00000264039 FUCA2Q9BTY2 467 aa18.86■□□□□ 0.61
GPC1-201ENST00000264039 OSBPL3Q9H4L5 887 aa18.86■□□□□ 0.61
GPC1-201ENST00000264039 NBPF7P0C2Y1 421 aaPredicted RBP18.85■□□□□ 0.61
GPC1-201ENST00000264039 DNAJC21Q5F1R6 531 aaKnown RBP18.85■□□□□ 0.61
GPC1-201ENST00000264039 HINFPQ9BQA5 517 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 ACBD3Q9H3P7 528 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 RAI14Q9P0K7 980 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 A0A1B0GUL7 405 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 PGBD1Q96JS3 809 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 WWC2Q6AWC2 1192 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 NEK1Q96PY6 1258 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 PDE11AQ9HCR9 933 aa18.85■□□□□ 0.61
GPC1-201ENST00000264039 ZNF330Q9Y3S2 320 aaPredicted RBP18.85■□□□□ 0.61
GPC1-201ENST00000264039 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
GPC1-201ENST00000264039 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.84■□□□□ 0.61
GPC1-201ENST00000264039 MRFAP1L1Q96HT8 127 aa18.84■□□□□ 0.61
GPC1-201ENST00000264039 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.61
GPC1-201ENST00000264039 CAGE1Q8TC20 777 aa18.83■□□□□ 0.61
GPC1-201ENST00000264039 MRPS27Q92552 414 aaKnown RBP18.83■□□□□ 0.61
GPC1-201ENST00000264039 USP28Q96RU2 1077 aa18.83■□□□□ 0.61
GPC1-201ENST00000264039 CCDC129Q6ZRS4 1044 aa18.83■□□□□ 0.6
GPC1-201ENST00000264039 USHBP1Q8N6Y0 703 aa18.83■□□□□ 0.6
GPC1-201ENST00000264039 CHL1O00533 1208 aa18.83■□□□□ 0.6
GPC1-201ENST00000264039 APOBRQ0VD83 1088 aa18.83■□□□□ 0.6
GPC1-201ENST00000264039 FKBP15Q5T1M5 1219 aa18.83■□□□□ 0.6
GPC1-201ENST00000264039 ADAM21Q9UKJ8 722 aa18.83■□□□□ 0.6
GPC1-201ENST00000264039 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 SLC27A2O14975 620 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 DPCR1Q3MIW9 517 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 ZNF446Q9NWS9 450 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 LCMT1Q9UIC8 334 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
GPC1-201ENST00000264039 PLA2G4AP47712 749 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 FANCCQ00597 558 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 EVI5LQ96CN4 794 aa18.82■□□□□ 0.6
GPC1-201ENST00000264039 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 CBFA2T2O43439 604 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 WASHC4Q2M389 1173 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 GOLGA1Q92805 767 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
GPC1-201ENST00000264039 JRKLQ9Y4A0 524 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
GPC1-201ENST00000264039 PPFIBP1Q86W92 1011 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 USP44Q9H0E7 712 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 WDHD1O75717 1129 aaPredicted RBP18.81■□□□□ 0.6
GPC1-201ENST00000264039 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 RDXP35241 583 aaKnown RBP18.81■□□□□ 0.6
GPC1-201ENST00000264039 HAND2P61296 217 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 MTHFSDQ2M296 383 aaKnown RBP18.81■□□□□ 0.6
GPC1-201ENST00000264039 ERC1Q8IUD2 1116 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 KLHDC4Q8TBB5 520 aa18.81■□□□□ 0.6
GPC1-201ENST00000264039 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
GPC1-201ENST00000264039 IVLP07476 585 aa18.8■□□□□ 0.6
GPC1-201ENST00000264039 ADKP55263 362 aaKnown RBP18.8■□□□□ 0.6
GPC1-201ENST00000264039 FAM160A1Q05DH4 1040 aa18.8■□□□□ 0.6
GPC1-201ENST00000264039 LRRFIP1Q32MZ4 808 aaKnown RBP18.8■□□□□ 0.6
GPC1-201ENST00000264039 IQSEC2Q5JU85 1478 aa18.8■□□□□ 0.6
GPC1-201ENST00000264039 DHX16O60231 1041 aaKnown RBP18.8■□□□□ 0.6
GPC1-201ENST00000264039 ATP1A3P13637 1013 aa18.8■□□□□ 0.6
GPC1-201ENST00000264039 TTC14Q96N46 770 aa18.8■□□□□ 0.6
GPC1-201ENST00000264039 DUOX2Q9NRD8 1548 aa18.8■□□□□ 0.6
GPC1-201ENST00000264039 HIP1O00291 1037 aa18.79■□□□□ 0.6
GPC1-201ENST00000264039 KIF5CO60282 957 aa18.79■□□□□ 0.6
GPC1-201ENST00000264039 PTCH1Q13635 1447 aa18.79■□□□□ 0.6
GPC1-201ENST00000264039 DDX46Q7L014 1031 aaKnown RBP18.79■□□□□ 0.6
GPC1-201ENST00000264039 SEC62Q99442 399 aaKnown RBP18.79■□□□□ 0.6
GPC1-201ENST00000264039 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
GPC1-201ENST00000264039 C8orf76Q96K31 380 aa18.79■□□□□ 0.6
GPC1-201ENST00000264039 FAM107BQ9H098 131 aa18.79■□□□□ 0.6
GPC1-201ENST00000264039 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
GPC1-201ENST00000264039 FHOD1Q9Y613 1164 aa18.79■□□□□ 0.6
GPC1-201ENST00000264039 ATP10AO60312 1499 aa18.79■□□□□ 0.6
GPC1-201ENST00000264039 PTPDC1A2A3K4 754 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 CCZ1BP86790 482 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 CCZ1P86791 482 aaPredicted RBP18.78■□□□□ 0.6
GPC1-201ENST00000264039 CCDC82Q8N4S0 544 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 PARD6BQ9BYG5 372 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 ZSWIM6Q9HCJ5 1215 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 RUFY1Q96T51 708 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 CRACR2AQ9BSW2 395 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 TULP1O00294 542 aaPredicted RBP18.78■□□□□ 0.6
GPC1-201ENST00000264039 MTX1Q13505 466 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 FAN1Q9Y2M0 1017 aa18.78■□□□□ 0.6
GPC1-201ENST00000264039 LIG3P49916 1009 aa18.77■□□□□ 0.6
GPC1-201ENST00000264039 SLC26A8Q96RN1 970 aa18.77■□□□□ 0.6
GPC1-201ENST00000264039 TCHHQ07283 1943 aa18.77■□□□□ 0.6
GPC1-201ENST00000264039 RPS6KB1P23443 525 aa18.77■□□□□ 0.6
GPC1-201ENST00000264039 ZNF569Q5MCW4 686 aa18.77■□□□□ 0.6
GPC1-201ENST00000264039 ICE2Q659A1 982 aa18.77■□□□□ 0.6
GPC1-201ENST00000264039 LONRF2Q1L5Z9 754 aa18.77■□□□□ 0.59
GPC1-201ENST00000264039 LONRF3Q496Y0 759 aa18.77■□□□□ 0.59
GPC1-201ENST00000264039 HOOK1Q9UJC3 728 aaKnown RBP18.77■□□□□ 0.59
GPC1-201ENST00000264039 EPB41L2O43491 1005 aaKnown RBP18.76■□□□□ 0.59
GPC1-201ENST00000264039 GOLGA5Q8TBA6 731 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 A0A0D9SFI3 127 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms