RNA–Protein interactions for RNA: ENST00000263246.7

PACSIN2-201, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN2, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-201ENST00000263246 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
PACSIN2-201ENST00000263246 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
PACSIN2-201ENST00000263246 RNF20Q5VTR2 975 aa18.44■□□□□ 0.54
PACSIN2-201ENST00000263246 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
PACSIN2-201ENST00000263246 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
PACSIN2-201ENST00000263246 UBE2HP62256 183 aa18.43■□□□□ 0.54
PACSIN2-201ENST00000263246 TSGA10IPQ3SY00 556 aa18.43■□□□□ 0.54
PACSIN2-201ENST00000263246 ZMYND15Q9H091 742 aa18.43■□□□□ 0.54
PACSIN2-201ENST00000263246 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 ALDH8A1Q9H2A2 487 aaPredicted RBP18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 NDUFB9Q9Y6M9 179 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 RPS6KB1P23443 525 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 DBNDD2Q9BQY9 259 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 PARP4Q9UKK3 1724 aaKnown RBP18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 FIBPO43427 364 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 CCDC183Q5T5S1 534 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 USPL1Q5W0Q7 1092 aa18.42■□□□□ 0.54
PACSIN2-201ENST00000263246 DNM1Q05193 864 aaKnown RBP18.41■□□□□ 0.54
PACSIN2-201ENST00000263246 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
PACSIN2-201ENST00000263246 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.41■□□□□ 0.54
PACSIN2-201ENST00000263246 HMG20BQ9P0W2 317 aa18.41■□□□□ 0.54
PACSIN2-201ENST00000263246 NOL7Q9UMY1 257 aaKnown RBP18.41■□□□□ 0.54
PACSIN2-201ENST00000263246 FOXO4P98177 505 aa18.41■□□□□ 0.54
PACSIN2-201ENST00000263246 H7C1W4 665 aa18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 TOB2Q14106 344 aaPredicted RBP18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 CHGBP05060 677 aa18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 HAUS7Q99871 368 aa18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 VPS37CA5D8V6 355 aaPredicted RBP18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 MSNP26038 577 aaKnown RBP18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
PACSIN2-201ENST00000263246 ZNF609O15014 1411 aa18.39■□□□□ 0.53
PACSIN2-201ENST00000263246 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.53
PACSIN2-201ENST00000263246 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
PACSIN2-201ENST00000263246 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
PACSIN2-201ENST00000263246 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
PACSIN2-201ENST00000263246 LARP1BQ659C4 914 aaKnown RBP18.38■□□□□ 0.53
PACSIN2-201ENST00000263246 WDR17Q8IZU2 1322 aa18.38■□□□□ 0.53
PACSIN2-201ENST00000263246 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
PACSIN2-201ENST00000263246 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
PACSIN2-201ENST00000263246 CCDC129Q6ZRS4 1044 aa18.37■□□□□ 0.53
PACSIN2-201ENST00000263246 ATG9AQ7Z3C6 839 aa18.37■□□□□ 0.53
PACSIN2-201ENST00000263246 SEC62Q99442 399 aaKnown RBP18.37■□□□□ 0.53
PACSIN2-201ENST00000263246 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
PACSIN2-201ENST00000263246 LETM1O95202 739 aaPredicted RBP18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 A1BGP04217 495 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 CDC37L1Q7L3B6 337 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 CWC25Q9NXE8 425 aaPredicted RBP18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 CHMP3Q9Y3E7 222 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 KRT32Q14532 448 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 TOM1L2Q6ZVM7 507 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 PRDM11Q9NQV5 511 aa18.36■□□□□ 0.53
PACSIN2-201ENST00000263246 PDIA4P13667 645 aaKnown RBP18.35■□□□□ 0.53
PACSIN2-201ENST00000263246 MCMDC2Q4G0Z9 681 aa18.35■□□□□ 0.53
PACSIN2-201ENST00000263246 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
PACSIN2-201ENST00000263246 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
PACSIN2-201ENST00000263246 NUP188Q5SRE5 1749 aa18.35■□□□□ 0.53
PACSIN2-201ENST00000263246 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
PACSIN2-201ENST00000263246 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
PACSIN2-201ENST00000263246 ZNF500O60304 480 aaPredicted RBP18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 OFD1O75665 1012 aa18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 PDCP20941 246 aa18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 NEK1Q96PY6 1258 aa18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 TJP1Q07157 1748 aa18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 CYP21A2P08686 494 aa18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 FERMT3Q86UX7 667 aa18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
PACSIN2-201ENST00000263246 STK3Q13188 491 aa18.33■□□□□ 0.53
PACSIN2-201ENST00000263246 FUCA2Q9BTY2 467 aa18.33■□□□□ 0.53
PACSIN2-201ENST00000263246 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.52
PACSIN2-201ENST00000263246 GPR108Q9NPR9 543 aa18.33■□□□□ 0.52
PACSIN2-201ENST00000263246 XIRP1Q702N8 1843 aaKnown RBP18.33■□□□□ 0.52
PACSIN2-201ENST00000263246 TIMM10P62072 90 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 FAM173BQ6P4H8 233 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 TTC6Q86TZ1 520 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 NEUROD6Q96NK8 337 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 COL5A2P05997 1499 aaPredicted RBP18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 MCM5P33992 734 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 CCDC191Q8NCU4 936 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 IL15P40933 162 aaPredicted RBP18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 HSPA2P54652 639 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 GIMAP6Q6P9H5 292 aa18.32■□□□□ 0.52
PACSIN2-201ENST00000263246 KRT85P78386 507 aa18.31■□□□□ 0.52
PACSIN2-201ENST00000263246 GTF3C6Q969F1 213 aa18.31■□□□□ 0.52
PACSIN2-201ENST00000263246 PALLDQ8WX93 1383 aa18.31■□□□□ 0.52
PACSIN2-201ENST00000263246 PAPPAQ13219 1627 aa18.31■□□□□ 0.52
PACSIN2-201ENST00000263246 GOLIM4O00461 696 aa18.31■□□□□ 0.52
PACSIN2-201ENST00000263246 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms