RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 A0A087WWV3 80 aa20.64■□□□□ 0.89
TRAM1-201ENST00000262213 HOXB7P09629 217 aa20.64■□□□□ 0.89
TRAM1-201ENST00000262213 ZSCAN25Q6NSZ9 544 aa20.64■□□□□ 0.89
TRAM1-201ENST00000262213 BRF1Q92994 677 aa20.64■□□□□ 0.89
TRAM1-201ENST00000262213 KAZALD1Q96I82 304 aa20.64■□□□□ 0.89
TRAM1-201ENST00000262213 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.89
TRAM1-201ENST00000262213 H3BQV1 296 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 GRM8O00222 908 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 HIP1O00291 1037 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 ALDH1L1O75891 902 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 TNNT1P13805 278 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 ANKRD1Q15327 319 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 IFFO2Q5TF58 517 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 DDX19AQ9NUU7 478 aaKnown RBP20.63■□□□□ 0.89
TRAM1-201ENST00000262213 CCDC129Q6ZRS4 1044 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 FBXW7Q969H0 707 aa20.63■□□□□ 0.89
TRAM1-201ENST00000262213 TPD52L1Q16890 204 aaPredicted RBP20.63■□□□□ 0.89
TRAM1-201ENST00000262213 KCNA6P17658 529 aa20.62■□□□□ 0.89
TRAM1-201ENST00000262213 CCDC144BQ3MJ40 725 aa20.62■□□□□ 0.89
TRAM1-201ENST00000262213 CCDC144CPQ8IYA2 1237 aa20.62■□□□□ 0.89
TRAM1-201ENST00000262213 CACTINQ8WUQ7 758 aaKnown RBP20.62■□□□□ 0.89
TRAM1-201ENST00000262213 IP6K1Q92551 441 aa20.62■□□□□ 0.89
TRAM1-201ENST00000262213 NPHP4O75161 1426 aaPredicted RBP20.61■□□□□ 0.89
TRAM1-201ENST00000262213 GIGYF1O75420 1035 aaPredicted RBP20.61■□□□□ 0.89
TRAM1-201ENST00000262213 FGD1P98174 961 aa20.61■□□□□ 0.89
TRAM1-201ENST00000262213 ARID5BQ14865 1188 aa20.61■□□□□ 0.89
TRAM1-201ENST00000262213 C1orf141Q5JVX7 400 aa20.61■□□□□ 0.89
TRAM1-201ENST00000262213 ANKRD7Q92527 254 aa20.61■□□□□ 0.89
TRAM1-201ENST00000262213 PLA2G4DQ86XP0 818 aa20.61■□□□□ 0.89
TRAM1-201ENST00000262213 FTOQ9C0B1 505 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRAM1-201ENST00000262213 NCBP1Q09161 790 aaKnown RBP20.6■□□□□ 0.89
TRAM1-201ENST00000262213 AKAP4Q5JQC9 854 aa20.6■□□□□ 0.89
TRAM1-201ENST00000262213 CTIFO43310 598 aaKnown RBP20.6■□□□□ 0.89
TRAM1-201ENST00000262213 MYL6BP14649 208 aa20.6■□□□□ 0.89
TRAM1-201ENST00000262213 Q6ZUG5 572 aa20.6■□□□□ 0.89
TRAM1-201ENST00000262213 SEC62Q99442 399 aaKnown RBP20.6■□□□□ 0.89
TRAM1-201ENST00000262213 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
TRAM1-201ENST00000262213 NAP1L2Q9ULW6 460 aaPredicted RBP20.6■□□□□ 0.89
TRAM1-201ENST00000262213 RNMTO43148 476 aaKnown RBP20.59■□□□□ 0.89
TRAM1-201ENST00000262213 PLEKHO1Q53GL0 409 aaPredicted RBP20.59■□□□□ 0.89
TRAM1-201ENST00000262213 RIC3Q7Z5B4 369 aa20.59■□□□□ 0.89
TRAM1-201ENST00000262213 DNAJC2Q99543 621 aaKnown RBP20.59■□□□□ 0.89
TRAM1-201ENST00000262213 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
TRAM1-201ENST00000262213 LINS1Q8NG48 757 aa20.59■□□□□ 0.89
TRAM1-201ENST00000262213 TDRD7Q8NHU6 1098 aaKnown RBP20.59■□□□□ 0.89
TRAM1-201ENST00000262213 GOLGA6L19H0YKK7 550 aa20.58■□□□□ 0.89
TRAM1-201ENST00000262213 TAF5LO75529 589 aa20.58■□□□□ 0.89
TRAM1-201ENST00000262213 C11orf57Q6ZUT1 292 aaPredicted RBP20.58■□□□□ 0.89
TRAM1-201ENST00000262213 ERCC4Q92889 916 aaPredicted RBP20.58■□□□□ 0.88
TRAM1-201ENST00000262213 SLIT1O75093 1534 aa20.58■□□□□ 0.88
TRAM1-201ENST00000262213 LMOD2Q6P5Q4 547 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 NEK1Q96PY6 1258 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 ARHGAP23Q9P227 1491 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 ADAMTSL3P82987 1691 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 RESTQ13127 1097 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 EPHA10Q5JZY3 1008 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 CCDC112Q8NEF3 446 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 GTF3C6Q969F1 213 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 HDAC5Q9UQL6 1122 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 MED23Q9ULK4 1368 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 SMTNL1A8MU46 457 aa20.57■□□□□ 0.88
TRAM1-201ENST00000262213 PIP4K2AP48426 406 aaPredicted RBP20.57■□□□□ 0.88
TRAM1-201ENST00000262213 UTP14CQ5TAP6 766 aaKnown RBP20.57■□□□□ 0.88
TRAM1-201ENST00000262213 FILIP1Q7Z7B0 1213 aa20.56■□□□□ 0.88
TRAM1-201ENST00000262213 PHF8Q9UPP1 1060 aa20.56■□□□□ 0.88
TRAM1-201ENST00000262213 USP27XA6NNY8 438 aa20.56■□□□□ 0.88
TRAM1-201ENST00000262213 SLC39A6Q13433 755 aa20.56■□□□□ 0.88
TRAM1-201ENST00000262213 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRAM1-201ENST00000262213 V9GYY5 206 aaPredicted RBP20.56■□□□□ 0.88
TRAM1-201ENST00000262213 MARF1Q9Y4F3 1742 aaKnown RBP20.55■□□□□ 0.88
TRAM1-201ENST00000262213 DDX58O95786 925 aaKnown RBP20.55■□□□□ 0.88
TRAM1-201ENST00000262213 IGKV5-2P06315 115 aa20.55■□□□□ 0.88
TRAM1-201ENST00000262213 GUCY1B3Q02153 619 aa20.55■□□□□ 0.88
TRAM1-201ENST00000262213 RBM43Q6ZSC3 357 aaKnown RBP20.55■□□□□ 0.88
TRAM1-201ENST00000262213 KLHL34Q8N239 644 aa20.55■□□□□ 0.88
TRAM1-201ENST00000262213 COL15A1P39059 1388 aa20.55■□□□□ 0.88
TRAM1-201ENST00000262213 TRMT1Q9NXH9 659 aaKnown RBP20.55■□□□□ 0.88
TRAM1-201ENST00000262213 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
TRAM1-201ENST00000262213 LTN1O94822 1766 aa20.54■□□□□ 0.88
TRAM1-201ENST00000262213 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
TRAM1-201ENST00000262213 PDIA4P13667 645 aaKnown RBP20.54■□□□□ 0.88
TRAM1-201ENST00000262213 SLFNL1Q499Z3 407 aa20.54■□□□□ 0.88
TRAM1-201ENST00000262213 CCAR1Q8IX12 1150 aaKnown RBP20.54■□□□□ 0.88
TRAM1-201ENST00000262213 MYD88Q99836 296 aa20.54■□□□□ 0.88
TRAM1-201ENST00000262213 USP16Q9Y5T5 823 aa20.54■□□□□ 0.88
TRAM1-201ENST00000262213 RGPD2P0DJD1 1756 aa20.54■□□□□ 0.88
TRAM1-201ENST00000262213 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
TRAM1-201ENST00000262213 DDX46Q7L014 1031 aaKnown RBP20.54■□□□□ 0.88
TRAM1-201ENST00000262213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.54■□□□□ 0.88
TRAM1-201ENST00000262213 PXDNQ92626 1479 aa20.54■□□□□ 0.88
TRAM1-201ENST00000262213 CHD2O14647 1828 aaKnown RBP20.53■□□□□ 0.88
TRAM1-201ENST00000262213 BECN2A8MW95 431 aa20.53■□□□□ 0.88
TRAM1-201ENST00000262213 PSME1Q06323 249 aa20.53■□□□□ 0.88
TRAM1-201ENST00000262213 SCRN1Q12765 414 aa20.53■□□□□ 0.88
TRAM1-201ENST00000262213 CEP135Q66GS9 1140 aa20.53■□□□□ 0.88
TRAM1-201ENST00000262213 TFCP2Q12800 502 aa20.53■□□□□ 0.88
TRAM1-201ENST00000262213 DBNLQ9UJU6 430 aaKnown RBP20.53■□□□□ 0.88
TRAM1-201ENST00000262213 CYP21A2P08686 494 aa20.52■□□□□ 0.88
TRAM1-201ENST00000262213 GOLPH3LQ9H4A5 285 aa20.52■□□□□ 0.88
TRAM1-201ENST00000262213 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms