RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 DDX19AQ9NUU7 478 aaKnown RBP18.77■□□□□ 0.6
LMNB1-201ENST00000261366 MAP3K2Q9Y2U5 619 aa18.77■□□□□ 0.6
LMNB1-201ENST00000261366 TOB2Q14106 344 aaPredicted RBP18.76■□□□□ 0.59
LMNB1-201ENST00000261366 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
LMNB1-201ENST00000261366 ERICH4A6NGS2 130 aa18.76■□□□□ 0.59
LMNB1-201ENST00000261366 PSMA5P28066 241 aa18.76■□□□□ 0.59
LMNB1-201ENST00000261366 FGD1P98174 961 aa18.76■□□□□ 0.59
LMNB1-201ENST00000261366 PROSER3Q2NL68 480 aa18.76■□□□□ 0.59
LMNB1-201ENST00000261366 ANKLE2Q86XL3 938 aa18.76■□□□□ 0.59
LMNB1-201ENST00000261366 FEZ1Q99689 392 aa18.76■□□□□ 0.59
LMNB1-201ENST00000261366 ST7Q9NRC1 585 aa18.76■□□□□ 0.59
LMNB1-201ENST00000261366 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 BECN2A8MW95 431 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 SKILP12757 684 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 MAP4K1Q92918 833 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 GUCY1B3Q02153 619 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 TDRD7Q8NHU6 1098 aaKnown RBP18.75■□□□□ 0.59
LMNB1-201ENST00000261366 KDRP35968 1356 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 RPS6KB1P23443 525 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 HOXC9P31274 260 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 ELF2Q15723 593 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
LMNB1-201ENST00000261366 DIP2AQ14689 1571 aa18.74■□□□□ 0.59
LMNB1-201ENST00000261366 PTPN14Q15678 1187 aa18.74■□□□□ 0.59
LMNB1-201ENST00000261366 CCDC129Q6ZRS4 1044 aa18.74■□□□□ 0.59
LMNB1-201ENST00000261366 LRRC8AQ8IWT6 810 aa18.74■□□□□ 0.59
LMNB1-201ENST00000261366 TOPAZ1Q8N9V7 1692 aa18.74■□□□□ 0.59
LMNB1-201ENST00000261366 ELP1O95163 1332 aa18.74■□□□□ 0.59
LMNB1-201ENST00000261366 EIF4A1P60842 406 aaKnown RBP18.74■□□□□ 0.59
LMNB1-201ENST00000261366 KMT5BQ4FZB7 885 aa18.73■□□□□ 0.59
LMNB1-201ENST00000261366 PAXBP1Q9Y5B6 917 aa18.73■□□□□ 0.59
LMNB1-201ENST00000261366 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■■■□ 20.2
LMNB1-201ENST00000261366 RNF20Q5VTR2 975 aa18.73■□□□□ 0.59
LMNB1-201ENST00000261366 KIF18AQ8NI77 898 aa18.73■□□□□ 0.59
LMNB1-201ENST00000261366 DDX41Q9UJV9 622 aaKnown RBP18.73■□□□□ 0.59
LMNB1-201ENST00000261366 SASH1O94885 1247 aa18.72■□□□□ 0.59
LMNB1-201ENST00000261366 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
LMNB1-201ENST00000261366 HTATSF1O43719 755 aaKnown RBP18.72■□□□□ 0.59
LMNB1-201ENST00000261366 TEFQ10587 303 aa18.72■□□□□ 0.59
LMNB1-201ENST00000261366 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
LMNB1-201ENST00000261366 FMNL2Q96PY5 1086 aa18.71■□□□□ 0.59
LMNB1-201ENST00000261366 RGPD8O14715 1765 aaPredicted RBP18.71■□□□□ 0.59
LMNB1-201ENST00000261366 FAM208AQ9UK61 1670 aaKnown RBP18.71■□□□□ 0.59
LMNB1-201ENST00000261366 BTBD11A6QL63 1104 aa18.71■□□□□ 0.59
LMNB1-201ENST00000261366 CCAR1Q8IX12 1150 aaKnown RBP18.71■□□□□ 0.59
LMNB1-201ENST00000261366 SEC62Q99442 399 aaKnown RBP18.71■□□□□ 0.59
LMNB1-201ENST00000261366 ADCY9O60503 1353 aa18.71■□□□□ 0.59
LMNB1-201ENST00000261366 Q6ZUG5 572 aa18.71■□□□□ 0.59
LMNB1-201ENST00000261366 SUCLG2Q96I99 432 aa18.71■□□□□ 0.59
LMNB1-201ENST00000261366 BICC1Q9H694 974 aaKnown RBP18.71■□□□□ 0.59
LMNB1-201ENST00000261366 FBXO38Q6PIJ6 1188 aa18.7■□□□□ 0.58
LMNB1-201ENST00000261366 RGPD1P0DJD0 1748 aa18.7■□□□□ 0.58
LMNB1-201ENST00000261366 CCT2P78371 535 aaKnown RBP18.7■□□□□ 0.58
LMNB1-201ENST00000261366 GOLPH3LQ9H4A5 285 aa18.7■□□□□ 0.58
LMNB1-201ENST00000261366 ANKRD1Q15327 319 aa18.69■□□□□ 0.58
LMNB1-201ENST00000261366 GORABQ5T7V8 394 aa18.69■□□□□ 0.58
LMNB1-201ENST00000261366 AOPEPQ8N6M6 819 aa18.69■□□□□ 0.58
LMNB1-201ENST00000261366 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
LMNB1-201ENST00000261366 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
LMNB1-201ENST00000261366 IQCB1Q15051 598 aa18.69■□□□□ 0.58
LMNB1-201ENST00000261366 SLFNL1Q499Z3 407 aa18.69■□□□□ 0.58
LMNB1-201ENST00000261366 ESCO1Q5FWF5 840 aa18.69■□□□□ 0.58
LMNB1-201ENST00000261366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.69■□□□□ 0.58
LMNB1-201ENST00000261366 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
LMNB1-201ENST00000261366 SETD1BQ9UPS6 1966 aaKnown RBP18.69■□□□□ 0.58
LMNB1-201ENST00000261366 SLFN14P0C7P3 912 aa18.68■□□□□ 0.58
LMNB1-201ENST00000261366 RESTQ13127 1097 aa18.68■□□□□ 0.58
LMNB1-201ENST00000261366 KCNB2Q92953 911 aa18.68■□□□□ 0.58
LMNB1-201ENST00000261366 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
LMNB1-201ENST00000261366 TRERF1Q96PN7 1200 aa18.67■□□□□ 0.58
LMNB1-201ENST00000261366 ME1P48163 572 aa18.67■□□□□ 0.58
LMNB1-201ENST00000261366 RBM43Q6ZSC3 357 aaKnown RBP18.67■□□□□ 0.58
LMNB1-201ENST00000261366 CHST3Q7LGC8 479 aa18.67■□□□□ 0.58
LMNB1-201ENST00000261366 LRRN4CLQ8ND94 238 aa18.67■□□□□ 0.58
LMNB1-201ENST00000261366 NCOA5Q9HCD5 579 aaKnown RBP18.67■□□□□ 0.58
LMNB1-201ENST00000261366 KRT222Q8N1A0 295 aa18.67■□□□□ 0.58
LMNB1-201ENST00000261366 GTF3C6Q969F1 213 aa18.67■□□□□ 0.58
LMNB1-201ENST00000261366 NEK1Q96PY6 1258 aa18.67■□□□□ 0.58
LMNB1-201ENST00000261366 BIN1O00499 593 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 ERC1Q8IUD2 1116 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 PXDNLA1KZ92 1463 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 KINO60870 393 aaKnown RBP18.66■□□□□ 0.58
LMNB1-201ENST00000261366 PSME1Q06323 249 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 ISM2Q6H9L7 571 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-201ENST00000261366 CCDC73Q6ZRK6 1079 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 ZNF397Q8NF99 534 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-201ENST00000261366 BBXQ8WY36 941 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-201ENST00000261366 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
LMNB1-201ENST00000261366 SCRN1Q12765 414 aa18.65■□□□□ 0.58
LMNB1-201ENST00000261366 STX1AQ16623 288 aa18.65■□□□□ 0.58
LMNB1-201ENST00000261366 ERCC6LQ2NKX8 1250 aa18.65■□□□□ 0.58
LMNB1-201ENST00000261366 USP28Q96RU2 1077 aa18.65■□□□□ 0.58
LMNB1-201ENST00000261366 NPHP4O75161 1426 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-201ENST00000261366 TAF5LO75529 589 aa18.65■□□□□ 0.58
LMNB1-201ENST00000261366 SMC2O95347 1197 aa18.65■□□□□ 0.58
LMNB1-201ENST00000261366 KAZALD1Q96I82 304 aa18.65■□□□□ 0.58
LMNB1-201ENST00000261366 MORC2Q9Y6X9 1032 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-201ENST00000261366 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms