RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 GCOM1H8Y6P7 765 aaPredicted RBP13.9□□□□□ -0.18
COL8A1-201ENST00000261037 SNRPA1P09661 255 aaKnown RBP13.9□□□□□ -0.18
COL8A1-201ENST00000261037 MYZAPP0CAP1 466 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 CRNKL1Q9BZJ0 848 aaKnown RBP13.9□□□□□ -0.18
COL8A1-201ENST00000261037 EXOC1Q9NV70 894 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 CYP7A1P22680 504 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 STX8Q9UNK0 236 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 KDM5BQ9UGL1 1544 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 UBA7P41226 1012 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 WTAPQ15007 396 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 RRAGBQ5VZM2 374 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 TRIM47Q96LD4 638 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 MEIS3Q99687 375 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 TMEM87AQ8NBN3 555 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 JADE2Q9NQC1 790 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 WDHD1O75717 1129 aaPredicted RBP13.89□□□□□ -0.19
COL8A1-201ENST00000261037 MAATS1Q7Z4T9 603 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
COL8A1-201ENST00000261037 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
COL8A1-201ENST00000261037 ECM2O94769 699 aaPredicted RBP13.89□□□□□ -0.19
COL8A1-201ENST00000261037 SNW1Q13573 536 aaKnown RBP13.89□□□□□ -0.19
COL8A1-201ENST00000261037 ZSCAN23Q3MJ62 389 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 CCDC152Q4G0S7 254 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 ANKRD13DQ6ZTN6 518 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 RHPN1Q8TCX5 695 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 XAGE3Q8WTP9 111 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
COL8A1-201ENST00000261037 COMMD10Q9Y6G5 202 aa13.89□□□□□ -0.19
COL8A1-201ENST00000261037 LDHCP07864 332 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 INCENPQ9NQS7 918 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 IFIT1BQ5T764 474 aaKnown RBP13.88□□□□□ -0.19
COL8A1-201ENST00000261037 MCM3P25205 808 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 CETN1Q12798 172 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 DUOX2Q9NRD8 1548 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 SDSP20132 328 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 MCM5P33992 734 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 FAM114A1Q8IWE2 563 aa13.88□□□□□ -0.19
COL8A1-201ENST00000261037 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
COL8A1-201ENST00000261037 TBCAO75347 108 aaKnown RBP13.87□□□□□ -0.19
COL8A1-201ENST00000261037 CA8P35219 290 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
COL8A1-201ENST00000261037 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
COL8A1-201ENST00000261037 TERF1P54274 439 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 CCDC102BQ68D86 513 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 ZNF165P49910 485 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 SBNO2Q9Y2G9 1366 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 TEX14Q8IWB6 1497 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 Q6ZUG5 572 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 ALG1Q9BT22 464 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 GSDMDP57764 484 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 DRC1Q96MC2 740 aa13.87□□□□□ -0.19
COL8A1-201ENST00000261037 NUCB1Q02818 461 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 C16orf71Q8IYS4 520 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-201ENST00000261037 HMG20BQ9P0W2 317 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 STAT6P42226 847 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 GSTO1P78417 241 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 PA2G4Q9UQ80 394 aaKnown RBP13.86□□□□□ -0.19
COL8A1-201ENST00000261037 UQCRFS1P1P0C7P4 283 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-201ENST00000261037 HCLS1P14317 486 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-201ENST00000261037 MARCKSP29966 332 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-201ENST00000261037 SYKP43405 635 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 UBE2HP62256 183 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 GRM1Q13255 1194 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 CEP135Q66GS9 1140 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 SMC1AQ14683 1233 aaKnown RBP13.86□□□□□ -0.19
COL8A1-201ENST00000261037 COPS6Q7L5N1 327 aa13.86□□□□□ -0.19
COL8A1-201ENST00000261037 N4BP3O15049 544 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 ZBTB43O43298 467 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
COL8A1-201ENST00000261037 ANO6Q4KMQ2 910 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 ZBTB9Q96C00 473 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 RBM8AQ9Y5S9 174 aaKnown RBP13.85□□□□□ -0.19
COL8A1-201ENST00000261037 STXBP4Q6ZWJ1 553 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 NSD2O96028 1365 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 GTF2F1P35269 517 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL8A1-201ENST00000261037 LMAN1P49257 510 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 PPP4R3BQ5MIZ7 849 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 WDR62O43379 1518 aa13.85□□□□□ -0.19
COL8A1-201ENST00000261037 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
COL8A1-201ENST00000261037 NF2P35240 595 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 GNG11P61952 73 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 RTN1Q16799 776 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
COL8A1-201ENST00000261037 KRT23Q9C075 422 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
COL8A1-201ENST00000261037 C14orf93Q9H972 538 aaKnown RBP13.84□□□□□ -0.19
COL8A1-201ENST00000261037 STAMBPO95630 424 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms