RNA–Protein interactions for RNA: ENST00000260665.11

LRPPRC-201, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPPRC, Length 6,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-201ENST00000260665 ATP2A1O14983 1001 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 AFMP43652 599 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 INTS8Q75QN2 995 aaKnown RBP13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 EXOC1Q9NV70 894 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 PABPN1LA6NDY0 278 aaKnown RBP13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 TUBBP07437 444 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 PPP2R3AQ06190 1150 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 FCHSD2O94868 740 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 NFE2L2Q16236 605 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 CCDC110Q8TBZ0 833 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 ATF3P18847 181 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 LMOD1P29536 600 aaPredicted RBP13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 IGHMBP2P38935 993 aaKnown RBP13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 IFT74Q96LB3 600 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 RAB11FIP4Q86YS3 637 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
LRPPRC-201ENST00000260665 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.91□□□□□ -0.184e-7■□□□□ 10.8
LRPPRC-201ENST00000260665 GPRASP1Q5JY77 1395 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 EVCP57679 992 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 PAXIP1Q6ZW49 1069 aaPredicted RBP13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 TBC1D5Q92609 795 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 CATIPQ7Z7H3 387 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 SYCP3Q8IZU3 236 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 PRPHP41219 470 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 TERF1P54274 439 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 CIB2O75838 187 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 DUSP27Q5VZP5 1158 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 TRIM7Q9C029 511 aa13.9□□□□□ -0.18
LRPPRC-201ENST00000260665 VIMP08670 466 aaKnown RBP13.9□□□□□ -0.19
LRPPRC-201ENST00000260665 PPM1FP49593 454 aaPredicted RBP13.9□□□□□ -0.19
LRPPRC-201ENST00000260665 TYRO3Q06418 890 aa13.9□□□□□ -0.19
LRPPRC-201ENST00000260665 GSTA5Q7RTV2 222 aa13.9□□□□□ -0.19
LRPPRC-201ENST00000260665 DZIP1Q86YF9 867 aaKnown RBP13.9□□□□□ -0.19
LRPPRC-201ENST00000260665 ERO1AQ96HE7 468 aa13.9□□□□□ -0.19
LRPPRC-201ENST00000260665 NEDD9Q14511 834 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 ALDH1L2Q3SY69 923 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 MICU3Q86XE3 530 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 NECAB1Q8N987 351 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 ANKRD50Q9ULJ7 1429 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 GABPB1Q06547 395 aaPredicted RBP13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 GBP7Q8N8V2 638 aaPredicted RBP13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 CABP1Q9NZU7 370 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 HPDP32754 393 aaPredicted RBP13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 MAP2K2P36507 400 aa13.89□□□□□ -0.19
LRPPRC-201ENST00000260665 NDC80O14777 642 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 TRMT1LQ7Z2T5 733 aaKnown RBP13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 VCX3BQ9H321 246 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 CCDC25Q86WR0 208 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 PPP1R9BQ96SB3 815 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 SLC26A6Q9BXS9 759 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 CASQ2O14958 399 aaPredicted RBP13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.193e-8■□□□□ 9.6
LRPPRC-201ENST00000260665 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 CUL5Q93034 780 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 MKRN1Q9UHC7 482 aaKnown RBP13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 MAP3K12Q12852 859 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 CEP85LQ5SZL2 805 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 LMBR1Q8WVP7 490 aa13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 UBLCP1Q8WVY7 318 aaPredicted RBP13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 ZNF444Q8N0Y2 327 aaPredicted RBP13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 NKTRP30414 1462 aaKnown RBP13.88□□□□□ -0.19
LRPPRC-201ENST00000260665 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 ALDH3A1P30838 453 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 LRPPRCP42704 1394 aaKnown RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 DHX29Q7Z478 1369 aaKnown RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 MTRF1LQ9UGC7 380 aaKnown RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 ARID5AQ03989 594 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 CHMP4BP1P59074 171 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 DNM1Q05193 864 aaKnown RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 RABEP2Q9H5N1 569 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 RRAGDQ9NQL2 400 aaPredicted RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 TSNAXIP1Q2TAA8 658 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 TTC21AQ8NDW8 1320 aa13.87□□□□□ -0.19
LRPPRC-201ENST00000260665 FYCO1Q9BQS8 1478 aa13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 F6X3S4 739 aa13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 GBP1P32455 592 aa13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 GJC1P36383 396 aa13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 CCDC50Q8IVM0 306 aa13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 TTC22Q5TAA0 569 aa13.86□□□□□ -0.19
LRPPRC-201ENST00000260665 NKIRAS1Q9NYS0 192 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms