RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ZBTB7BO15156 539 aaPredicted RBP25.94■■□□□ 1.74
RTCA-201ENST00000260563 CHRNA5P30532 468 aa25.94■■□□□ 1.74
RTCA-201ENST00000260563 CTSWP56202 376 aa25.94■■□□□ 1.74
RTCA-201ENST00000260563 CRY2Q49AN0 593 aa25.94■■□□□ 1.74
RTCA-201ENST00000260563 NLGN2Q8NFZ4 835 aa25.94■■□□□ 1.74
RTCA-201ENST00000260563 SUCLG2Q96I99 432 aa25.94■■□□□ 1.74
RTCA-201ENST00000260563 SYT17Q9BSW7 474 aa25.94■■□□□ 1.74
RTCA-201ENST00000260563 RPGRQ92834 1020 aaKnown RBP25.93■■□□□ 1.74
RTCA-201ENST00000260563 HDAC5Q9UQL6 1122 aa25.93■■□□□ 1.74
RTCA-201ENST00000260563 SRGNP10124 158 aa25.93■■□□□ 1.74
RTCA-201ENST00000260563 DPEP1P16444 411 aa25.93■■□□□ 1.74
RTCA-201ENST00000260563 SF3B3Q15393 1217 aaKnown RBP25.92■■□□□ 1.74
RTCA-201ENST00000260563 MASTLQ96GX5 879 aa25.92■■□□□ 1.74
RTCA-201ENST00000260563 A0A0G2JLW4 131 aa25.91■■□□□ 1.74
RTCA-201ENST00000260563 NPR1P16066 1061 aa25.91■■□□□ 1.74
RTCA-201ENST00000260563 CCDC152Q4G0S7 254 aa25.91■■□□□ 1.74
RTCA-201ENST00000260563 ZBTB40Q9NUA8 1239 aa25.91■■□□□ 1.74
RTCA-201ENST00000260563 ARFGEF1Q9Y6D6 1849 aa25.9■■□□□ 1.74
RTCA-201ENST00000260563 BICC1Q9H694 974 aaKnown RBP25.9■■□□□ 1.74
RTCA-201ENST00000260563 LRRFIP2Q9Y608 721 aaKnown RBP25.9■■□□□ 1.74
RTCA-201ENST00000260563 FOXO4P98177 505 aa25.89■■□□□ 1.74
RTCA-201ENST00000260563 EPHA10Q5JZY3 1008 aa25.89■■□□□ 1.74
RTCA-201ENST00000260563 STYK1Q6J9G0 422 aa25.89■■□□□ 1.74
RTCA-201ENST00000260563 ZNF622Q969S3 477 aaKnown RBP eCLIP25.89■■□□□ 1.74
RTCA-201ENST00000260563 RBM17Q96I25 401 aaKnown RBP25.89■■□□□ 1.74
RTCA-201ENST00000260563 KAZALD1Q96I82 304 aa25.89■■□□□ 1.74
RTCA-201ENST00000260563 CCDC85AQ96PX6 553 aaPredicted RBP25.89■■□□□ 1.74
RTCA-201ENST00000260563 GNAI2P04899 355 aa25.88■■□□□ 1.73
RTCA-201ENST00000260563 TTLL11Q8NHH1 800 aa25.88■■□□□ 1.73
RTCA-201ENST00000260563 SLX4Q8IY92 1834 aa25.88■■□□□ 1.73
RTCA-201ENST00000260563 DDX46Q7L014 1031 aaKnown RBP25.88■■□□□ 1.73
RTCA-201ENST00000260563 CHMP3Q9Y3E7 222 aa25.88■■□□□ 1.73
RTCA-201ENST00000260563 RTL9Q8NET4 1388 aa25.87■■□□□ 1.73
RTCA-201ENST00000260563 CSF1RP07333 972 aa25.87■■□□□ 1.73
RTCA-201ENST00000260563 KCNA3P22001 575 aa25.87■■□□□ 1.73
RTCA-201ENST00000260563 LMBR1LQ6UX01 489 aa25.87■■□□□ 1.73
RTCA-201ENST00000260563 COL4A1P02462 1669 aa25.86■■□□□ 1.73
RTCA-201ENST00000260563 HOXA10P31260 410 aaPredicted RBP25.86■■□□□ 1.73
RTCA-201ENST00000260563 FAM161AQ3B820 660 aa25.86■■□□□ 1.73
RTCA-201ENST00000260563 RABL6Q3YEC7 729 aaPredicted RBP25.86■■□□□ 1.73
RTCA-201ENST00000260563 GREM2Q9H772 168 aa25.86■■□□□ 1.73
RTCA-201ENST00000260563 PIM2Q9P1W9 311 aa25.86■■□□□ 1.73
RTCA-201ENST00000260563 ALDH1B1P30837 517 aa25.85■■□□□ 1.73
RTCA-201ENST00000260563 ANKRD44Q8N8A2 993 aa25.85■■□□□ 1.73
RTCA-201ENST00000260563 CNKSR1Q969H4 720 aa25.85■■□□□ 1.73
RTCA-201ENST00000260563 CCDC136Q96JN2 1154 aa25.85■■□□□ 1.73
RTCA-201ENST00000260563 GOLGB1Q14789 3259 aaKnown RBP25.84■■□□□ 1.73
RTCA-201ENST00000260563 LRRC37AA6NMS7 1700 aa25.84■■□□□ 1.73
RTCA-201ENST00000260563 CRAMP1Q96RY5 1269 aa25.84■■□□□ 1.73
RTCA-201ENST00000260563 C1orf115Q9H7X2 142 aa25.84■■□□□ 1.73
RTCA-201ENST00000260563 B4GALNT3Q6L9W6 998 aa25.83■■□□□ 1.73
RTCA-201ENST00000260563 TTLL6Q8N841 843 aa25.83■■□□□ 1.73
RTCA-201ENST00000260563 WWC3Q9ULE0 1092 aa25.83■■□□□ 1.73
RTCA-201ENST00000260563 ITGA6P23229 1130 aa25.83■■□□□ 1.72
RTCA-201ENST00000260563 GRAPQ13588 217 aa25.83■■□□□ 1.72
RTCA-201ENST00000260563 GRAPLQ8TC17 118 aaPredicted RBP25.83■■□□□ 1.72
RTCA-201ENST00000260563 SEC31BQ9NQW1 1179 aa25.83■■□□□ 1.72
RTCA-201ENST00000260563 CDC5LQ99459 802 aaKnown RBP25.82■■□□□ 1.72
RTCA-201ENST00000260563 PCDHB15Q9Y5E8 787 aa25.82■■□□□ 1.72
RTCA-201ENST00000260563 ANKRD18BA2A2Z9 1011 aa25.81■■□□□ 1.72
RTCA-201ENST00000260563 IFIT5Q13325 482 aaKnown RBP25.81■■□□□ 1.72
RTCA-201ENST00000260563 CCDC57Q2TAC2 916 aa25.81■■□□□ 1.72
RTCA-201ENST00000260563 DALRD3Q5D0E6 543 aaKnown RBP25.81■■□□□ 1.72
RTCA-201ENST00000260563 PRPF40BQ6NWY9 871 aaKnown RBP25.81■■□□□ 1.72
RTCA-201ENST00000260563 A0A1B0GUL6 1792 aa25.81■■□□□ 1.72
RTCA-201ENST00000260563 CELF1Q92879 486 aaKnown RBP25.8■■□□□ 1.72
RTCA-201ENST00000260563 BCS1LQ9Y276 419 aa25.79■■□□□ 1.72
RTCA-201ENST00000260563 PPEF1O14829 653 aaPredicted RBP25.78■■□□□ 1.72
RTCA-201ENST00000260563 ANKRD18AQ8IVF6 992 aa25.78■■□□□ 1.72
RTCA-201ENST00000260563 MTX1Q13505 466 aa25.78■■□□□ 1.72
RTCA-201ENST00000260563 TAF7LQ5H9L4 462 aa25.78■■□□□ 1.72
RTCA-201ENST00000260563 IGHMBP2P38935 993 aaKnown RBP25.77■■□□□ 1.72
RTCA-201ENST00000260563 FER1L6Q2WGJ9 1857 aa25.76■■□□□ 1.71
RTCA-201ENST00000260563 SRGAP3O43295 1099 aa25.76■■□□□ 1.71
RTCA-201ENST00000260563 BBOX1O75936 387 aa25.76■■□□□ 1.71
RTCA-201ENST00000260563 RPS8P62241 208 aaKnown RBP25.76■■□□□ 1.71
RTCA-201ENST00000260563 TMC4Q7Z404 712 aa25.76■■□□□ 1.71
RTCA-201ENST00000260563 PELP1Q8IZL8 1130 aaKnown RBP25.76■■□□□ 1.71
RTCA-201ENST00000260563 CEP85Q6P2H3 762 aa25.75■■□□□ 1.71
RTCA-201ENST00000260563 MPHOSPH8Q99549 860 aa25.74■■□□□ 1.71
RTCA-201ENST00000260563 RPAP2Q8IXW5 612 aaPredicted RBP25.73■■□□□ 1.71
RTCA-201ENST00000260563 ZNF594Q96JF6 807 aaPredicted RBP25.73■■□□□ 1.71
RTCA-201ENST00000260563 TMX4Q9H1E5 349 aaPredicted RBP25.73■■□□□ 1.71
RTCA-201ENST00000260563 ZNF219Q9P2Y4 722 aaPredicted RBP25.73■■□□□ 1.71
RTCA-201ENST00000260563 PNMA6EA0A0J9YXQ4 647 aa25.73■■□□□ 1.71
RTCA-201ENST00000260563 C21orf2O43822 256 aa25.73■■□□□ 1.71
RTCA-201ENST00000260563 ATP8B2P98198 1209 aa25.73■■□□□ 1.71
RTCA-201ENST00000260563 LTBP1Q14766 1721 aa25.72■■□□□ 1.71
RTCA-201ENST00000260563 RFX5P48382 616 aaPredicted RBP25.72■■□□□ 1.71
RTCA-201ENST00000260563 SOGA3Q5TF21 947 aa25.72■■□□□ 1.71
RTCA-201ENST00000260563 RWDD1Q9H446 243 aaPredicted RBP25.72■■□□□ 1.71
RTCA-201ENST00000260563 BSDC1Q9NW68 430 aaPredicted RBP25.72■■□□□ 1.71
RTCA-201ENST00000260563 ATP6V0A2Q9Y487 856 aa25.72■■□□□ 1.71
RTCA-201ENST00000260563 IGHDP01880 384 aa25.71■■□□□ 1.71
RTCA-201ENST00000260563 HDAC1Q13547 482 aaPredicted RBP25.71■■□□□ 1.71
RTCA-201ENST00000260563 YBX3P16989 372 aaKnown RBP eCLIP25.7■■□□□ 1.74e-8■■□□□ 14.1
RTCA-201ENST00000260563 GPR162Q16538 588 aa25.7■■□□□ 1.7
RTCA-201ENST00000260563 SP8Q8IXZ3 490 aa25.7■■□□□ 1.7
RTCA-201ENST00000260563 KLHDC4Q8TBB5 520 aa25.7■■□□□ 1.7
RTCA-201ENST00000260563 UTRNP46939 3433 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms