RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 A0A1W2PRG0 241 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 AKR1B10O60218 316 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 HMGB1P09429 215 aaKnown RBP15.05■□□□□ 0
PCDHGA3-201ENST00000253812 ZSCAN22P10073 491 aaPredicted RBP15.05■□□□□ 0
PCDHGA3-201ENST00000253812 MXRA7P84157 204 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 RAB3GAP1Q15042 981 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 ZSCAN25Q6NSZ9 544 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 TBC1D9Q6ZT07 1266 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 RPAINQ86UA6 219 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 AACSQ86V21 672 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 UBAC1Q9BSL1 405 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 MRVI1Q9Y6F6 885 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ 0
PCDHGA3-201ENST00000253812 WDR62O43379 1518 aa15.05■□□□□ -0
PCDHGA3-201ENST00000253812 SRGAP3O43295 1099 aa15.05■□□□□ -0
PCDHGA3-201ENST00000253812 FOXO3O43524 673 aa15.05■□□□□ -0
PCDHGA3-201ENST00000253812 GJB2P29033 226 aa15.05■□□□□ -0
PCDHGA3-201ENST00000253812 PPP2R3AQ06190 1150 aa15.05■□□□□ -0
PCDHGA3-201ENST00000253812 CACNA2D3Q8IZS8 1091 aa15.05■□□□□ -0
PCDHGA3-201ENST00000253812 CTNNBL1Q8WYA6 563 aaPredicted RBP15.05■□□□□ -0
PCDHGA3-201ENST00000253812 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.05■□□□□ -0
PCDHGA3-201ENST00000253812 BUB1BO60566 1050 aaPredicted RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 KANK3Q6NY19 840 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 N4BP3O15049 544 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 CCDC102BQ68D86 513 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 CCDC77Q9BR77 488 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 ANAPC15P60006 121 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 ATP11AP98196 1134 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 ZBTB16Q05516 673 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 SETDB1Q15047 1291 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 RBBP5Q15291 538 aaKnown RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 VCXQ9H320 206 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 SUDS3Q9H7L9 328 aaPredicted RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 LRPPRCP42704 1394 aaKnown RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 MTIF2P46199 727 aaKnown RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 RARSP54136 660 aaKnown RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 DMTNQ08495 405 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 WHAMMP3Q1A5X7 153 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 ZSCAN16Q9H4T2 348 aaPredicted RBP15.04■□□□□ -0
PCDHGA3-201ENST00000253812 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
PCDHGA3-201ENST00000253812 NOP2P46087 812 aaKnown RBP15.03■□□□□ -0
PCDHGA3-201ENST00000253812 IKQ13123 557 aaPredicted RBP15.03■□□□□ -0
PCDHGA3-201ENST00000253812 USP48Q86UV5 1035 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.03■□□□□ -0
PCDHGA3-201ENST00000253812 SERPINA10Q9UK55 444 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 SH3BGRP55822 239 aaPredicted RBP15.03■□□□□ -0
PCDHGA3-201ENST00000253812 PRPF4BQ13523 1007 aaKnown RBP15.03■□□□□ -0
PCDHGA3-201ENST00000253812 TTC39AQ5SRH9 613 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 CTAGE1Q96RT6 745 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 PPP1R12CQ9BZL4 782 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 A2MP01023 1474 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 TACC1O75410 805 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 TSNAXIP1Q2TAA8 658 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 MCM10Q7L590 875 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 SMC5Q8IY18 1101 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 CFAP58Q5T655 872 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 KIF1BPQ96EK5 621 aa15.03■□□□□ -0
PCDHGA3-201ENST00000253812 CABP4P57796 275 aa15.02■□□□□ -0
PCDHGA3-201ENST00000253812 SPAG1Q07617 926 aa15.02■□□□□ -0
PCDHGA3-201ENST00000253812 TMX3Q96JJ7 454 aa15.02■□□□□ -0
PCDHGA3-201ENST00000253812 PHF8Q9UPP1 1060 aa15.02□□□□□ -0.01
PCDHGA3-201ENST00000253812 EXOC6BQ9Y2D4 811 aa15.02□□□□□ -0.01
PCDHGA3-201ENST00000253812 CCDC96Q2M329 555 aa15.02□□□□□ -0.01
PCDHGA3-201ENST00000253812 DUOX2Q9NRD8 1548 aa15.02□□□□□ -0.01
PCDHGA3-201ENST00000253812 CCDC172P0C7W6 258 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 TYRO3Q06418 890 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 CCDC38Q502W7 563 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 TCHPQ9BT92 498 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 RFC1P35251 1148 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 MICAL1Q8TDZ2 1067 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 MACROD2A1Z1Q3 448 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 RHOXF2BP0C7M4 288 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 RHOXF2Q9BQY4 288 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 DNAJC25Q9H1X3 360 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 SPATS2LQ9NUQ6 558 aaKnown RBP15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 DACT1Q9NYF0 836 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 NUP160Q12769 1436 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 TCOF1Q13428 1488 aaKnown RBP15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 DISP1Q96F81 1524 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 CCDC196A0A1B0GTZ2 297 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 KRT86O43790 486 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 SH2D4BQ5SQS7 431 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 STMN2Q93045 179 aa15.01□□□□□ -0.01
PCDHGA3-201ENST00000253812 TMEM132AQ24JP5 1023 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 KCNH5Q8NCM2 988 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 PPP1R14CQ8TAE6 165 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 SELENOOQ9BVL4 669 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 TRIM7Q9C029 511 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 BRD2P25440 801 aaKnown RBP15□□□□□ -0.01
PCDHGA3-201ENST00000253812 PUF60Q9UHX1 559 aaKnown RBP15□□□□□ -0.01
PCDHGA3-201ENST00000253812 IKBKGQ9Y6K9 419 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 GUCY1B3Q02153 619 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 PYM1Q9BRP8 204 aaKnown RBP15□□□□□ -0.01
PCDHGA3-201ENST00000253812 KRT83P78385 493 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 TUBB2AQ13885 445 aa15□□□□□ -0.01
PCDHGA3-201ENST00000253812 TUBB2BQ9BVA1 445 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms