RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 Q6ZUG5 572 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 MYD88Q99836 296 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.34■□□□□ 0.21
GFAP-201ENST00000253408 V9GYY5 206 aaPredicted RBP16.34■□□□□ 0.21
GFAP-201ENST00000253408 NPHP1O15259 732 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 DDX58O95786 925 aaKnown RBP16.34■□□□□ 0.21
GFAP-201ENST00000253408 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
GFAP-201ENST00000253408 TRMT1Q9NXH9 659 aaKnown RBP16.34■□□□□ 0.21
GFAP-201ENST00000253408 FMN2Q9NZ56 1722 aa16.34■□□□□ 0.21
GFAP-201ENST00000253408 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
GFAP-201ENST00000253408 AGLP35573 1532 aa16.33■□□□□ 0.21
GFAP-201ENST00000253408 ZNF75DP51815 510 aa16.33■□□□□ 0.21
GFAP-201ENST00000253408 ARID5BQ14865 1188 aa16.33■□□□□ 0.21
GFAP-201ENST00000253408 IP6K1Q92551 441 aa16.33■□□□□ 0.21
GFAP-201ENST00000253408 CHMP4AQ9BY43 222 aa16.33■□□□□ 0.21
GFAP-201ENST00000253408 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.21
GFAP-201ENST00000253408 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
GFAP-201ENST00000253408 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
GFAP-201ENST00000253408 ALDH1L1O75891 902 aa16.33■□□□□ 0.2
GFAP-201ENST00000253408 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
GFAP-201ENST00000253408 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
GFAP-201ENST00000253408 AKAP4Q5JQC9 854 aa16.33■□□□□ 0.2
GFAP-201ENST00000253408 PGBD1Q96JS3 809 aa16.33■□□□□ 0.2
GFAP-201ENST00000253408 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
GFAP-201ENST00000253408 NEK1Q96PY6 1258 aa16.32■□□□□ 0.2
GFAP-201ENST00000253408 HDAC5Q9UQL6 1122 aa16.32■□□□□ 0.2
GFAP-201ENST00000253408 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
GFAP-201ENST00000253408 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
GFAP-201ENST00000253408 CHST3Q7LGC8 479 aa16.32■□□□□ 0.2
GFAP-201ENST00000253408 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
GFAP-201ENST00000253408 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
GFAP-201ENST00000253408 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.2
GFAP-201ENST00000253408 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
GFAP-201ENST00000253408 NEUROD6Q96NK8 337 aa16.32■□□□□ 0.2
GFAP-201ENST00000253408 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
GFAP-201ENST00000253408 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
GFAP-201ENST00000253408 CCDC144BQ3MJ40 725 aa16.31■□□□□ 0.2
GFAP-201ENST00000253408 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
GFAP-201ENST00000253408 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
GFAP-201ENST00000253408 KAZALD1Q96I82 304 aa16.31■□□□□ 0.2
GFAP-201ENST00000253408 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
GFAP-201ENST00000253408 TFCP2Q12800 502 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
GFAP-201ENST00000253408 HOXB7P09629 217 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 ME1P48163 572 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 MTX1Q13505 466 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 XAGE3Q8WTP9 111 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
GFAP-201ENST00000253408 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
GFAP-201ENST00000253408 NALCNQ8IZF0 1738 aa16.29■□□□□ 0.2
GFAP-201ENST00000253408 C11orf57Q6ZUT1 292 aaPredicted RBP16.29■□□□□ 0.2
GFAP-201ENST00000253408 COPS6Q7L5N1 327 aa16.29■□□□□ 0.2
GFAP-201ENST00000253408 TAF5LO75529 589 aa16.29■□□□□ 0.2
GFAP-201ENST00000253408 ZSCAN20P17040 1043 aaPredicted RBP16.29■□□□□ 0.2
GFAP-201ENST00000253408 APOBRQ0VD83 1088 aa16.29■□□□□ 0.2
GFAP-201ENST00000253408 CCDC73Q6ZRK6 1079 aa16.29■□□□□ 0.2
GFAP-201ENST00000253408 UBE3BQ7Z3V4 1068 aa16.29■□□□□ 0.2
GFAP-201ENST00000253408 SYTL4Q96C24 671 aaPredicted RBP16.29■□□□□ 0.2
GFAP-201ENST00000253408 RAB11FIP4Q86YS3 637 aa16.28■□□□□ 0.2
GFAP-201ENST00000253408 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
GFAP-201ENST00000253408 ELP1O95163 1332 aa16.28■□□□□ 0.2
GFAP-201ENST00000253408 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
GFAP-201ENST00000253408 ZRSR1Q15695 479 aaKnown RBP16.28■□□□□ 0.2
GFAP-201ENST00000253408 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
GFAP-201ENST00000253408 DMTNQ08495 405 aa16.28■□□□□ 0.2
GFAP-201ENST00000253408 DBNDD2Q9BQY9 259 aa16.28■□□□□ 0.2
GFAP-201ENST00000253408 DIP2AQ14689 1571 aa16.27■□□□□ 0.2
GFAP-201ENST00000253408 KINO60870 393 aaKnown RBP16.27■□□□□ 0.2
GFAP-201ENST00000253408 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
GFAP-201ENST00000253408 ZNF771Q7L3S4 317 aaPredicted RBP16.27■□□□□ 0.2
GFAP-201ENST00000253408 DBNLQ9UJU6 430 aaKnown RBP16.27■□□□□ 0.2
GFAP-201ENST00000253408 CFAP45Q9UL16 551 aa16.27■□□□□ 0.2
GFAP-201ENST00000253408 NCBP1Q09161 790 aaKnown RBP16.27■□□□□ 0.19
GFAP-201ENST00000253408 CEP135Q66GS9 1140 aa16.27■□□□□ 0.19
GFAP-201ENST00000253408 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.19
GFAP-201ENST00000253408 KCNB2Q92953 911 aa16.27■□□□□ 0.19
GFAP-201ENST00000253408 TOPAZ1Q8N9V7 1692 aa16.26■□□□□ 0.19
GFAP-201ENST00000253408 USP27XA6NNY8 438 aa16.26■□□□□ 0.19
GFAP-201ENST00000253408 SCRN1Q12765 414 aa16.26■□□□□ 0.19
GFAP-201ENST00000253408 SDF4Q9BRK5 362 aa16.26■□□□□ 0.19
GFAP-201ENST00000253408 CYP21A2P08686 494 aa16.26■□□□□ 0.19
GFAP-201ENST00000253408 ZC3H6P61129 1189 aaKnown RBP16.26■□□□□ 0.19
GFAP-201ENST00000253408 KRT32Q14532 448 aa16.26■□□□□ 0.19
GFAP-201ENST00000253408 HMG20BQ9P0W2 317 aa16.26■□□□□ 0.19
GFAP-201ENST00000253408 GOLIM4O00461 696 aa16.25■□□□□ 0.19
GFAP-201ENST00000253408 SKILP12757 684 aa16.25■□□□□ 0.19
GFAP-201ENST00000253408 RESTQ13127 1097 aa16.25■□□□□ 0.19
GFAP-201ENST00000253408 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
GFAP-201ENST00000253408 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
GFAP-201ENST00000253408 SMTNL1A8MU46 457 aa16.25■□□□□ 0.19
GFAP-201ENST00000253408 SF3A1Q15459 793 aaKnown RBP16.25■□□□□ 0.19
GFAP-201ENST00000253408 OTUD7BQ6GQQ9 843 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms