RNA–Protein interactions for RNA: ENST00000251879.10

RIC1-201, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 1 (best) BASIC

Gene RIC1, Length 4,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-201ENST00000251879 Q6ZUG5 572 aa16.95■□□□□ 0.3
RIC1-201ENST00000251879 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
RIC1-201ENST00000251879 DEF6Q9H4E7 631 aa16.95■□□□□ 0.3
RIC1-201ENST00000251879 BRMS1Q9HCU9 246 aa16.95■□□□□ 0.3
RIC1-201ENST00000251879 NSD2O96028 1365 aa16.95■□□□□ 0.3
RIC1-201ENST00000251879 KIF1BO60333 1816 aa16.95■□□□□ 0.3
RIC1-201ENST00000251879 RNF17Q9BXT8 1623 aaKnown RBP16.94■□□□□ 0.3
RIC1-201ENST00000251879 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 KRT28Q7Z3Y7 464 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 ANAPC15P60006 121 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
RIC1-201ENST00000251879 CCDC12Q8WUD4 166 aaPredicted RBP16.94■□□□□ 0.3
RIC1-201ENST00000251879 ZHX3Q9H4I2 956 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 CALCOCO1Q9P1Z2 691 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
RIC1-201ENST00000251879 MYRIPQ8NFW9 859 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
RIC1-201ENST00000251879 PAXBP1Q9Y5B6 917 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 MINDY4BA8MYZ0 360 aa16.94■□□□□ 0.3
RIC1-201ENST00000251879 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
RIC1-201ENST00000251879 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 BMS1Q14692 1282 aaKnown RBP16.93■□□□□ 0.3
RIC1-201ENST00000251879 MAGEC2Q9UBF1 373 aaPredicted RBP16.93■□□□□ 0.3
RIC1-201ENST00000251879 G3V3G9 751 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 IPO4Q8TEX9 1081 aaKnown RBP16.93■□□□□ 0.3
RIC1-201ENST00000251879 PPP1R9BQ96SB3 815 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 MAP3K19Q56UN5 1328 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 A0A1B0GVL5 298 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
RIC1-201ENST00000251879 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
RIC1-201ENST00000251879 KIF2AO00139 706 aaPredicted RBP16.92■□□□□ 0.3
RIC1-201ENST00000251879 UBASH3AP57075 661 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 A0A087WWV3 80 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 ZSCAN12O43309 604 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 RXRAP19793 462 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 EIF5P55010 431 aaKnown RBP16.92■□□□□ 0.3
RIC1-201ENST00000251879 CCDC181Q5TID7 509 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 TIGD1Q96MW7 591 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 ZNHIT6Q9NWK9 470 aaKnown RBP16.92■□□□□ 0.3
RIC1-201ENST00000251879 NUTM2BA6NNL0 878 aaPredicted RBP16.92■□□□□ 0.3
RIC1-201ENST00000251879 NUTM2EB1AL46 878 aaPredicted RBP16.92■□□□□ 0.3
RIC1-201ENST00000251879 NUTM2AQ8IVF1 878 aaPredicted RBP16.92■□□□□ 0.3
RIC1-201ENST00000251879 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
RIC1-201ENST00000251879 SSBP05455 408 aaKnown RBP eCLIP16.91■□□□□ 0.3
RIC1-201ENST00000251879 APOBRQ0VD83 1088 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 KARSQ15046 597 aaKnown RBP16.91■□□□□ 0.3
RIC1-201ENST00000251879 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.33e-6■■■□□ 18
RIC1-201ENST00000251879 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 KIAA1328Q86T90 577 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 CTNNA3Q9UI47 895 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 SLU7O95391 586 aaKnown RBP16.91■□□□□ 0.3
RIC1-201ENST00000251879 EPS15P42566 896 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 ELF2Q15723 593 aa16.91■□□□□ 0.3
RIC1-201ENST00000251879 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
RIC1-201ENST00000251879 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.35e-6■■■■□ 22.5
RIC1-201ENST00000251879 SNX14Q9Y5W7 946 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 KIF5CO60282 957 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 NCOA5Q9HCD5 579 aaKnown RBP16.9■□□□□ 0.3
RIC1-201ENST00000251879 PPRC1Q5VV67 1664 aaKnown RBP16.9■□□□□ 0.3
RIC1-201ENST00000251879 CTAGE5O15320 804 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
RIC1-201ENST00000251879 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
RIC1-201ENST00000251879 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
RIC1-201ENST00000251879 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.3
RIC1-201ENST00000251879 BRD1O95696 1058 aa16.89■□□□□ 0.3
RIC1-201ENST00000251879 GSDMDP57764 484 aa16.89■□□□□ 0.3
RIC1-201ENST00000251879 METTL24Q5JXM2 366 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 SMAP1Q8IYB5 467 aaPredicted RBP16.89■□□□□ 0.29
RIC1-201ENST00000251879 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 RDXP35241 583 aaKnown RBP16.89■□□□□ 0.29
RIC1-201ENST00000251879 PPARDQ03181 441 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 PLCD4Q9BRC7 762 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 ABCA6Q8N139 1617 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 ZNF213O14771 459 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 TXLNAP40222 546 aa16.89■□□□□ 0.29
RIC1-201ENST00000251879 NBPF7P0C2Y1 421 aaPredicted RBP16.88■□□□□ 0.29
RIC1-201ENST00000251879 GPTP24298 496 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 GPATCH11Q8N954 259 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 FAM107BQ9H098 131 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 PYCARDQ9ULZ3 195 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 MYOM2P54296 1465 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 JAK2O60674 1132 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 AFMP43652 599 aa16.88■□□□□ 0.29
RIC1-201ENST00000251879 LZTFL1Q9NQ48 299 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms