RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.16
LSM8-201ENST00000249299 RIC1Q4ADV7 1423 aa16.07■□□□□ 0.16
LSM8-201ENST00000249299 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
LSM8-201ENST00000249299 NFIXQ14938 502 aa16.06■□□□□ 0.16
LSM8-201ENST00000249299 EPHA10Q5JZY3 1008 aa16.06■□□□□ 0.16
LSM8-201ENST00000249299 COPRSQ9NQ92 184 aa16.06■□□□□ 0.16
LSM8-201ENST00000249299 AFDNP55196 1824 aaKnown RBP16.05■□□□□ 0.16
LSM8-201ENST00000249299 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
LSM8-201ENST00000249299 CTSWP56202 376 aa16.05■□□□□ 0.16
LSM8-201ENST00000249299 NUCB1Q02818 461 aa16.05■□□□□ 0.16
LSM8-201ENST00000249299 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
LSM8-201ENST00000249299 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
LSM8-201ENST00000249299 ERC1Q8IUD2 1116 aa16.05■□□□□ 0.16
LSM8-201ENST00000249299 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
LSM8-201ENST00000249299 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
LSM8-201ENST00000249299 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
LSM8-201ENST00000249299 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
LSM8-201ENST00000249299 GTF2E1P29083 439 aaPredicted RBP16.03■□□□□ 0.16
LSM8-201ENST00000249299 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
LSM8-201ENST00000249299 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
LSM8-201ENST00000249299 CCDC57Q2TAC2 916 aa16.03■□□□□ 0.16
LSM8-201ENST00000249299 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
LSM8-201ENST00000249299 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
LSM8-201ENST00000249299 COL24A1Q17RW2 1714 aa16.02■□□□□ 0.16
LSM8-201ENST00000249299 SURF6O75683 361 aaKnown RBP16.02■□□□□ 0.16
LSM8-201ENST00000249299 IFIT5Q13325 482 aaKnown RBP16.02■□□□□ 0.16
LSM8-201ENST00000249299 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.16
LSM8-201ENST00000249299 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
LSM8-201ENST00000249299 KIF1BPQ96EK5 621 aa16.02■□□□□ 0.16
LSM8-201ENST00000249299 CIAO1O76071 339 aa16.01■□□□□ 0.15
LSM8-201ENST00000249299 PTPN12Q05209 780 aaKnown RBP16.01■□□□□ 0.15
LSM8-201ENST00000249299 RTL5Q5HYW3 569 aaPredicted RBP16.01■□□□□ 0.15
LSM8-201ENST00000249299 BICDL1Q6ZP65 573 aa16.01■□□□□ 0.15
LSM8-201ENST00000249299 CNBD1Q8NA66 436 aa16.01■□□□□ 0.15
LSM8-201ENST00000249299 JARID2Q92833 1246 aaPredicted RBP16.01■□□□□ 0.15
LSM8-201ENST00000249299 NLRP3Q96P20 1036 aa16.01■□□□□ 0.15
LSM8-201ENST00000249299 PDZRN3Q9UPQ7 1066 aa16.01■□□□□ 0.15
LSM8-201ENST00000249299 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
LSM8-201ENST00000249299 SERPINB2P05120 415 aa16■□□□□ 0.15
LSM8-201ENST00000249299 ST5P78524 1137 aa16■□□□□ 0.15
LSM8-201ENST00000249299 G3BP1Q13283 466 aaKnown RBP eCLIP16■□□□□ 0.15
LSM8-201ENST00000249299 ERFEQ4G0M1 354 aa16■□□□□ 0.15
LSM8-201ENST00000249299 ANKRD45Q5TZF3 282 aa16■□□□□ 0.15
LSM8-201ENST00000249299 LRRCC1Q9C099 1032 aa16■□□□□ 0.15
LSM8-201ENST00000249299 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
LSM8-201ENST00000249299 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
LSM8-201ENST00000249299 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
LSM8-201ENST00000249299 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
LSM8-201ENST00000249299 IL15P40933 162 aaPredicted RBP15.98■□□□□ 0.15
LSM8-201ENST00000249299 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
LSM8-201ENST00000249299 CDC5LQ99459 802 aaKnown RBP15.98■□□□□ 0.15
LSM8-201ENST00000249299 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
LSM8-201ENST00000249299 FAM177BA6PVY3 158 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 EYA2O00167 538 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 NPHP1O15259 732 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 ITGA6P23229 1130 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 DDR1Q08345 913 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 PRR5LQ6MZQ0 368 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 RHPN1Q8TCX5 695 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 GPR108Q9NPR9 543 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 EXOC6BQ9Y2D4 811 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 CHMP3Q9Y3E7 222 aa15.97■□□□□ 0.15
LSM8-201ENST00000249299 OS9Q13438 667 aaPredicted RBP15.96■□□□□ 0.15
LSM8-201ENST00000249299 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
LSM8-201ENST00000249299 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
LSM8-201ENST00000249299 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
LSM8-201ENST00000249299 GREM2Q9H772 168 aa15.96■□□□□ 0.15
LSM8-201ENST00000249299 LAMB2P55268 1798 aa15.96■□□□□ 0.15
LSM8-201ENST00000249299 MMP10P09238 476 aa15.95■□□□□ 0.14
LSM8-201ENST00000249299 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
LSM8-201ENST00000249299 CLASRPQ8N2M8 674 aaKnown RBP15.95■□□□□ 0.14
LSM8-201ENST00000249299 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
LSM8-201ENST00000249299 TUBGCP6Q96RT7 1819 aa15.95■□□□□ 0.14
LSM8-201ENST00000249299 LNPKQ9C0E8 428 aa15.94■□□□□ 0.14
LSM8-201ENST00000249299 OSBPL3Q9H4L5 887 aa15.94■□□□□ 0.14
LSM8-201ENST00000249299 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
LSM8-201ENST00000249299 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
LSM8-201ENST00000249299 IGHMBP2P38935 993 aaKnown RBP15.94■□□□□ 0.14
LSM8-201ENST00000249299 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
LSM8-201ENST00000249299 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
LSM8-201ENST00000249299 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
LSM8-201ENST00000249299 RIPOR2Q9Y4F9 1068 aa15.94■□□□□ 0.14
LSM8-201ENST00000249299 NRXN2Q9P2S2 1712 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 AOX1Q06278 1338 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 MROH5Q6ZUA9 1318 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 SASH1O94885 1247 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 PRR29P0C7W0 189 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 PDE6BP35913 854 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
LSM8-201ENST00000249299 TMC4Q7Z404 712 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 MPHOSPH8Q99549 860 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 BSDC1Q9NW68 430 aaPredicted RBP15.93■□□□□ 0.14
LSM8-201ENST00000249299 STAP2Q9UGK3 403 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 AKAP2Q9Y2D5 859 aa15.93■□□□□ 0.14
LSM8-201ENST00000249299 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
LSM8-201ENST00000249299 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
LSM8-201ENST00000249299 CRAMP1Q96RY5 1269 aa15.92■□□□□ 0.14
LSM8-201ENST00000249299 MTFR1LQ9H019 292 aa15.92■□□□□ 0.14
LSM8-201ENST00000249299 CEP126Q9P2H0 1117 aa15.92■□□□□ 0.14
LSM8-201ENST00000249299 MYH3P11055 1940 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms