RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 EPB41L2O43491 1005 aaKnown RBP18.42■□□□□ 0.54
SIN3B-201ENST00000248054 SOGA3Q5TF21 947 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 CLTCQ00610 1675 aaKnown RBP18.42■□□□□ 0.54
SIN3B-201ENST00000248054 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
SIN3B-201ENST00000248054 IQCA1Q86XH1 822 aa18.41■□□□□ 0.54
SIN3B-201ENST00000248054 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
SIN3B-201ENST00000248054 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
SIN3B-201ENST00000248054 RFC4P35249 363 aa18.4■□□□□ 0.54
SIN3B-201ENST00000248054 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
SIN3B-201ENST00000248054 CEBPZQ03701 1054 aaKnown RBP18.4■□□□□ 0.54
SIN3B-201ENST00000248054 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
SIN3B-201ENST00000248054 NCOA7Q8NI08 942 aa18.4■□□□□ 0.54
SIN3B-201ENST00000248054 CCDC94Q9BW85 323 aaPredicted RBP18.4■□□□□ 0.54
SIN3B-201ENST00000248054 ARHGEF40Q8TER5 1519 aa18.4■□□□□ 0.54
SIN3B-201ENST00000248054 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
SIN3B-201ENST00000248054 SPDYE4A6NLX3 237 aa18.4■□□□□ 0.54
SIN3B-201ENST00000248054 IKQ13123 557 aaPredicted RBP18.4■□□□□ 0.54
SIN3B-201ENST00000248054 CWC15Q9P013 229 aaKnown RBP18.4■□□□□ 0.54
SIN3B-201ENST00000248054 PHKG2P15735 406 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 CHMLP26374 656 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 SSFA2P28290 1259 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 USP5P45974 858 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 TMX3Q96JJ7 454 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 RUFY1Q96T51 708 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 PA2G4Q9UQ80 394 aaKnown RBP18.39■□□□□ 0.53
SIN3B-201ENST00000248054 ATP2B1P20020 1258 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
SIN3B-201ENST00000248054 RBM8AQ9Y5S9 174 aaKnown RBP18.39■□□□□ 0.53
SIN3B-201ENST00000248054 PARP10Q53GL7 1025 aa18.39■□□□□ 0.53
SIN3B-201ENST00000248054 STX6O43752 255 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 FILIP1LQ4L180 1135 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 SMARCE1Q969G3 411 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 C8orf76Q96K31 380 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 DDX11Q96FC9 970 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 SETDB2Q96T68 719 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
SIN3B-201ENST00000248054 GIGYF1O75420 1035 aaPredicted RBP18.38■□□□□ 0.53
SIN3B-201ENST00000248054 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
SIN3B-201ENST00000248054 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 CCDC183Q5T5S1 534 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 CCDC43Q96MW1 224 aaKnown RBP18.38■□□□□ 0.53
SIN3B-201ENST00000248054 MTMR7Q9Y216 660 aa18.38■□□□□ 0.53
SIN3B-201ENST00000248054 MAP3K11Q16584 847 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 ZGPATQ8N5A5 531 aaKnown RBP18.37■□□□□ 0.53
SIN3B-201ENST00000248054 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 KDRP35968 1356 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 ST5P78524 1137 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 CDK5RAP3Q96JB5 506 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 VWDEQ8N2E2 1590 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 USP26Q9BXU7 913 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 DEPDC5O75140 1603 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 MCM5P33992 734 aa18.37■□□□□ 0.53
SIN3B-201ENST00000248054 NIP7Q9Y221 180 aaKnown RBP eCLIP18.37■□□□□ 0.53
SIN3B-201ENST00000248054 MINDY4BA8MYZ0 360 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 IRS4O14654 1257 aaPredicted RBP18.36■□□□□ 0.53
SIN3B-201ENST00000248054 CEP57L1Q8IYX8 460 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 CTCFLQ8NI51 663 aaPredicted RBP18.36■□□□□ 0.53
SIN3B-201ENST00000248054 PTCH1Q13635 1447 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 SYCE3A1L190 88 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 GJB2P29033 226 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 GSTO1P78417 241 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 TMOD2Q9NZR1 351 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 PNPLA6Q8IY17 1366 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 IQGAP1P46940 1657 aa18.36■□□□□ 0.53
SIN3B-201ENST00000248054 BAG3O95817 575 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 CNNM2Q9H8M5 875 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 CTAGE5O15320 804 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 INTS4Q96HW7 963 aaKnown RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 POLR3DP05423 398 aaPredicted RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 ACSBG1Q96GR2 724 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 NMIQ13287 307 aaPredicted RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 GCKRQ14397 625 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 ZNF496Q96IT1 587 aaPredicted RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 C8orf37Q96NL8 207 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 GTPBP4Q9BZE4 634 aaKnown RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 ZSCAN16Q9H4T2 348 aaPredicted RBP18.35■□□□□ 0.53
SIN3B-201ENST00000248054 MKNK2Q9HBH9 465 aa18.35■□□□□ 0.53
SIN3B-201ENST00000248054 EYA2O00167 538 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 KDM4AO75164 1064 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 PTPRMP28827 1452 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 RNF113AO15541 343 aaKnown RBP18.34■□□□□ 0.53
SIN3B-201ENST00000248054 TFCP2Q12800 502 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 KRT23Q9C075 422 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 FSD2A1L4K1 749 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 GOLGA8AA7E2F4 631 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 CBFA2T2O43439 604 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 GNAT2P19087 354 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 TMTC2Q8N394 836 aa18.34■□□□□ 0.53
SIN3B-201ENST00000248054 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.53
SIN3B-201ENST00000248054 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.53
SIN3B-201ENST00000248054 NCAPD2Q15021 1401 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms