RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 ALDH1L1O75891 902 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 TBX22Q9Y458 520 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 UNC13BO14795 1591 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 LIG1P18858 919 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 ABCA6Q8N139 1617 aa16.02■□□□□ 0.16
NCLN-201ENST00000246117 TMEM2Q9UHN6 1383 aa16.02■□□□□ 0.16
NCLN-201ENST00000246117 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.15
NCLN-201ENST00000246117 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.15
NCLN-201ENST00000246117 BEND3Q5T5X7 828 aa16.02■□□□□ 0.15
NCLN-201ENST00000246117 TPCN1Q9ULQ1 816 aa16.02■□□□□ 0.15
NCLN-201ENST00000246117 A0A1B0GVL5 298 aa16.02■□□□□ 0.15
NCLN-201ENST00000246117 EFCAB6Q5THR3 1501 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 TMC6Q7Z403 805 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 GIGYF1O75420 1035 aaPredicted RBP16.01■□□□□ 0.15
NCLN-201ENST00000246117 LMOD1P29536 600 aaPredicted RBP16.01■□□□□ 0.15
NCLN-201ENST00000246117 NAPBQ9H115 298 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 ERICH4A6NGS2 130 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 SART3Q15020 963 aaKnown RBP16.01■□□□□ 0.15
NCLN-201ENST00000246117 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 ZSWIM4Q9H7M6 989 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 PAG1Q9NWQ8 432 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 CTNNA3Q9UI47 895 aa16.01■□□□□ 0.15
NCLN-201ENST00000246117 CHGBP05060 677 aa16■□□□□ 0.15
NCLN-201ENST00000246117 PTPN14Q15678 1187 aa16■□□□□ 0.15
NCLN-201ENST00000246117 AOPEPQ8N6M6 819 aa16■□□□□ 0.15
NCLN-201ENST00000246117 IL25Q9H293 177 aa16■□□□□ 0.15
NCLN-201ENST00000246117 JAG2Q9Y219 1238 aa16■□□□□ 0.15
NCLN-201ENST00000246117 ZDHHC9Q9Y397 364 aa16■□□□□ 0.15
NCLN-201ENST00000246117 PTPDC1A2A3K4 754 aa16■□□□□ 0.15
NCLN-201ENST00000246117 G3V3G9 751 aa16■□□□□ 0.15
NCLN-201ENST00000246117 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
NCLN-201ENST00000246117 NOL7Q9UMY1 257 aaKnown RBP16■□□□□ 0.15
NCLN-201ENST00000246117 PLXNC1O60486 1568 aa16■□□□□ 0.15
NCLN-201ENST00000246117 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
NCLN-201ENST00000246117 MAP7D2Q96T17 732 aa16■□□□□ 0.15
NCLN-201ENST00000246117 ZKSCAN3Q9BRR0 538 aa16■□□□□ 0.15
NCLN-201ENST00000246117 PDCL3Q9H2J4 239 aa16■□□□□ 0.15
NCLN-201ENST00000246117 TTC41PQ6P2S7 1318 aa16■□□□□ 0.15
NCLN-201ENST00000246117 DHX8Q14562 1220 aaKnown RBP15.99■□□□□ 0.15
NCLN-201ENST00000246117 RNF17Q9BXT8 1623 aaKnown RBP15.99■□□□□ 0.15
NCLN-201ENST00000246117 FTOQ9C0B1 505 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■■■■□ 19.3
NCLN-201ENST00000246117 DDX19AQ9NUU7 478 aaKnown RBP15.99■□□□□ 0.15
NCLN-201ENST00000246117 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
NCLN-201ENST00000246117 KIAA0232Q92628 1395 aa15.99■□□□□ 0.15
NCLN-201ENST00000246117 LRMPQ12912 555 aa15.99■□□□□ 0.15
NCLN-201ENST00000246117 SLC9C2Q5TAH2 1124 aa15.99■□□□□ 0.15
NCLN-201ENST00000246117 TRIM22Q8IYM9 498 aa15.99■□□□□ 0.15
NCLN-201ENST00000246117 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
NCLN-201ENST00000246117 SFPQP23246 707 aaKnown RBP eCLIP15.98■□□□□ 0.15
NCLN-201ENST00000246117 ZNF589Q86UQ0 364 aaPredicted RBP15.98■□□□□ 0.15
NCLN-201ENST00000246117 UBAC1Q9BSL1 405 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 ABCC3O15438 1527 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 TET3O43151 1660 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 RANBP6O60518 1105 aaKnown RBP15.98■□□□□ 0.15
NCLN-201ENST00000246117 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
NCLN-201ENST00000246117 TRERF1Q96PN7 1200 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 MYL10Q9BUA6 226 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 SLC26A6Q9BXS9 759 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 TULP4Q9NRJ4 1543 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 SPHKAPQ2M3C7 1700 aa15.98■□□□□ 0.15
NCLN-201ENST00000246117 GCKRQ14397 625 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
NCLN-201ENST00000246117 TTC6Q86TZ1 520 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 ANO10Q9NW15 660 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 STARD3NLO95772 234 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 TSR1Q2NL82 804 aaKnown RBP15.97■□□□□ 0.15
NCLN-201ENST00000246117 TPM1P09493 284 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 SPECC1Q5M775 1068 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 TTLL7Q6ZT98 887 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 HOOK1Q9UJC3 728 aaKnown RBP15.97■□□□□ 0.15
NCLN-201ENST00000246117 URI1O94763 535 aaPredicted RBP15.97■□□□□ 0.15
NCLN-201ENST00000246117 MIGA1Q8NAN2 632 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 MTMR6Q9Y217 621 aa15.97■□□□□ 0.15
NCLN-201ENST00000246117 A0A1B0GUL7 405 aa15.96■□□□□ 0.15
NCLN-201ENST00000246117 RPS6KB1P23443 525 aa15.96■□□□□ 0.15
NCLN-201ENST00000246117 ATP2B2Q01814 1243 aa15.96■□□□□ 0.15
NCLN-201ENST00000246117 GOLGA8AA7E2F4 631 aa15.96■□□□□ 0.15
NCLN-201ENST00000246117 SKILP12757 684 aa15.96■□□□□ 0.15
NCLN-201ENST00000246117 ZCRB1Q8TBF4 217 aaKnown RBP15.96■□□□□ 0.15
NCLN-201ENST00000246117 LSG1Q9H089 658 aaKnown RBP15.96■□□□□ 0.15
NCLN-201ENST00000246117 PRC1O43663 620 aa15.96■□□□□ 0.14
NCLN-201ENST00000246117 PTPN21Q16825 1174 aa15.96■□□□□ 0.14
NCLN-201ENST00000246117 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.14
NCLN-201ENST00000246117 JMYQ8N9B5 988 aa15.96■□□□□ 0.14
NCLN-201ENST00000246117 MLH3Q9UHC1 1453 aa15.96■□□□□ 0.14
NCLN-201ENST00000246117 LRRC7Q96NW7 1537 aa15.95■□□□□ 0.14
NCLN-201ENST00000246117 ATP2B3Q16720 1220 aa15.95■□□□□ 0.14
NCLN-201ENST00000246117 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
NCLN-201ENST00000246117 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
NCLN-201ENST00000246117 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
NCLN-201ENST00000246117 GLI2P10070 1586 aa15.95■□□□□ 0.14
NCLN-201ENST00000246117 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
NCLN-201ENST00000246117 TSPOAP1O95153 1857 aa15.94■□□□□ 0.14
NCLN-201ENST00000246117 NR1I2O75469 434 aa15.94■□□□□ 0.14
NCLN-201ENST00000246117 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
NCLN-201ENST00000246117 CNNM3Q8NE01 707 aa15.94■□□□□ 0.14
NCLN-201ENST00000246117 METAP2P50579 478 aaKnown RBP eCLIP15.94■□□□□ 0.14
NCLN-201ENST00000246117 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms