RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 UVSSAQ2YD98 709 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 TRAPPC3LQ5T215 181 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 FAM184AQ8NB25 1140 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 TMEM87AQ8NBN3 555 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 ARHGEF1Q92888 912 aaKnown RBP24.77■■□□□ 1.56
SNX3-201ENST00000230085 PKNOX2Q96KN3 472 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 ESYT1Q9BSJ8 1104 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 ZMYND15Q9H091 742 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 DBF4Q9UBU7 674 aaPredicted RBP24.77■■□□□ 1.56
SNX3-201ENST00000230085 LRP10Q7Z4F1 713 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 COL23A1Q86Y22 540 aaPredicted RBP24.77■■□□□ 1.56
SNX3-201ENST00000230085 SRCIN1Q9C0H9 1055 aa24.77■■□□□ 1.56
SNX3-201ENST00000230085 DDX21Q9NR30 783 aaKnown RBP eCLIP24.77■■□□□ 1.56
SNX3-201ENST00000230085 NCLP19338 710 aaKnown RBP24.76■■□□□ 1.55
SNX3-201ENST00000230085 COL15A1P39059 1388 aa24.75■■□□□ 1.55
SNX3-201ENST00000230085 CHMP4AQ9BY43 222 aa24.75■■□□□ 1.55
SNX3-201ENST00000230085 SLC4A2P04920 1241 aa24.73■■□□□ 1.55
SNX3-201ENST00000230085 ADRA2BP18089 450 aa24.73■■□□□ 1.55
SNX3-201ENST00000230085 FLAD1Q8NFF5 587 aa24.73■■□□□ 1.55
SNX3-201ENST00000230085 STK31Q9BXU1 1019 aa24.73■■□□□ 1.55
SNX3-201ENST00000230085 TBC1D2BQ9UPU7 963 aa24.73■■□□□ 1.55
SNX3-201ENST00000230085 SMARCA5O60264 1052 aaPredicted RBP24.72■■□□□ 1.55
SNX3-201ENST00000230085 RFC4P35249 363 aa24.72■■□□□ 1.55
SNX3-201ENST00000230085 NEK4P51957 841 aa24.72■■□□□ 1.55
SNX3-201ENST00000230085 SASS6Q6UVJ0 657 aa24.72■■□□□ 1.55
SNX3-201ENST00000230085 PHAXQ9H814 394 aaKnown RBP24.72■■□□□ 1.55
SNX3-201ENST00000230085 RBM27Q9P2N5 1060 aaKnown RBP24.72■■□□□ 1.55
SNX3-201ENST00000230085 QSER1Q2KHR3 1735 aa24.72■■□□□ 1.55
SNX3-201ENST00000230085 SYCE3A1L190 88 aa24.72■■□□□ 1.55
SNX3-201ENST00000230085 AIMP1Q12904 312 aaKnown RBP24.72■■□□□ 1.55
SNX3-201ENST00000230085 GNAI2P04899 355 aa24.71■■□□□ 1.55
SNX3-201ENST00000230085 COPS6Q7L5N1 327 aa24.71■■□□□ 1.55
SNX3-201ENST00000230085 TSPY26PQ9H489 355 aa24.71■■□□□ 1.55
SNX3-201ENST00000230085 HYPKQ9NX55 129 aa24.71■■□□□ 1.55
SNX3-201ENST00000230085 TTLL7Q6ZT98 887 aa24.7■■□□□ 1.55
SNX3-201ENST00000230085 DZIP3Q86Y13 1208 aaKnown RBP24.7■■□□□ 1.55
SNX3-201ENST00000230085 SRP68Q9UHB9 627 aaKnown RBP24.7■■□□□ 1.55
SNX3-201ENST00000230085 C4AP0C0L4 1744 aa24.7■■□□□ 1.54
SNX3-201ENST00000230085 XAGE3Q8WTP9 111 aa24.7■■□□□ 1.54
SNX3-201ENST00000230085 GNAI3P08754 354 aa24.69■■□□□ 1.54
SNX3-201ENST00000230085 CHMLP26374 656 aa24.69■■□□□ 1.54
SNX3-201ENST00000230085 G2E3Q7L622 706 aa24.69■■□□□ 1.54
SNX3-201ENST00000230085 R3HCC1Q9Y3T6 440 aaKnown RBP24.69■■□□□ 1.54
SNX3-201ENST00000230085 SRCAPQ6ZRS2 3230 aa24.68■■□□□ 1.54
SNX3-201ENST00000230085 WDR33Q9C0J8 1336 aaKnown RBP24.68■■□□□ 1.54
SNX3-201ENST00000230085 A0A087WZG4 1122 aa24.68■■□□□ 1.54
SNX3-201ENST00000230085 LRRCC1Q9C099 1032 aa24.68■■□□□ 1.54
SNX3-201ENST00000230085 NARFQ9UHQ1 456 aa24.68■■□□□ 1.54
SNX3-201ENST00000230085 NSFL1CQ9UNZ2 370 aaKnown RBP24.68■■□□□ 1.54
SNX3-201ENST00000230085 USP42Q9H9J4 1324 aaKnown RBP24.68■■□□□ 1.54
SNX3-201ENST00000230085 ZPR1O75312 459 aa24.67■■□□□ 1.54
SNX3-201ENST00000230085 MX1P20591 662 aa24.67■■□□□ 1.54
SNX3-201ENST00000230085 USPL1Q5W0Q7 1092 aa24.67■■□□□ 1.54
SNX3-201ENST00000230085 LETM1O95202 739 aaPredicted RBP24.67■■□□□ 1.54
SNX3-201ENST00000230085 ATP8B2P98198 1209 aa24.66■■□□□ 1.54
SNX3-201ENST00000230085 UQCRHLA0A096LP55 91 aa24.65■■□□□ 1.54
SNX3-201ENST00000230085 CAMTA2O94983 1202 aa24.65■■□□□ 1.54
SNX3-201ENST00000230085 UQCRHP07919 91 aa24.65■■□□□ 1.54
SNX3-201ENST00000230085 ZBTB3Q9H5J0 574 aa24.65■■□□□ 1.54
SNX3-201ENST00000230085 RPAP1Q9BWH6 1393 aaPredicted RBP24.65■■□□□ 1.54
SNX3-201ENST00000230085 GYS1P13807 737 aa24.65■■□□□ 1.54
SNX3-201ENST00000230085 CASZ1Q86V15 1759 aa24.64■■□□□ 1.54
SNX3-201ENST00000230085 FLIIQ13045 1269 aa24.64■■□□□ 1.53
SNX3-201ENST00000230085 KIF6Q6ZMV9 814 aa24.64■■□□□ 1.53
SNX3-201ENST00000230085 BCL2L12Q9HB09 334 aa24.64■■□□□ 1.53
SNX3-201ENST00000230085 MAP3K15Q6ZN16 1313 aa24.63■■□□□ 1.53
SNX3-201ENST00000230085 ZBTB7AO95365 584 aa24.63■■□□□ 1.53
SNX3-201ENST00000230085 KIAA2012Q0VF49 1180 aa24.63■■□□□ 1.53
SNX3-201ENST00000230085 HLFQ16534 295 aa24.63■■□□□ 1.53
SNX3-201ENST00000230085 MSL1Q68DK7 614 aa24.63■■□□□ 1.53
SNX3-201ENST00000230085 HSPA4P34932 840 aa24.62■■□□□ 1.53
SNX3-201ENST00000230085 ANKRD13DQ6ZTN6 518 aa24.62■■□□□ 1.53
SNX3-201ENST00000230085 PRIMPOLQ96LW4 560 aa24.62■■□□□ 1.53
SNX3-201ENST00000230085 GTF2F1P35269 517 aaKnown RBP eCLIP24.62■■□□□ 1.53
SNX3-201ENST00000230085 SLC16A10Q8TF71 515 aa24.62■■□□□ 1.53
SNX3-201ENST00000230085 PALD1Q9ULE6 856 aa24.61■■□□□ 1.53
SNX3-201ENST00000230085 TCHHQ07283 1943 aa24.61■■□□□ 1.53
SNX3-201ENST00000230085 ERVV-1B6SEH8 477 aa24.6■■□□□ 1.53
SNX3-201ENST00000230085 FKBP5Q13451 457 aaPredicted RBP24.59■■□□□ 1.53
SNX3-201ENST00000230085 PLBD2Q8NHP8 589 aa24.59■■□□□ 1.53
SNX3-201ENST00000230085 ATF5Q9Y2D1 282 aaPredicted RBP24.59■■□□□ 1.53
SNX3-201ENST00000230085 PI4KAP2A4QPH2 592 aa24.59■■□□□ 1.53
SNX3-201ENST00000230085 CCDC183Q5T5S1 534 aa24.59■■□□□ 1.53
SNX3-201ENST00000230085 PI4KAP1Q8N8J0 262 aa24.59■■□□□ 1.53
SNX3-201ENST00000230085 MYRIPQ8NFW9 859 aa24.59■■□□□ 1.53
SNX3-201ENST00000230085 PIBF1Q8WXW3 757 aa24.59■■□□□ 1.53
SNX3-201ENST00000230085 BCORQ6W2J9 1755 aa24.59■■□□□ 1.53
SNX3-201ENST00000230085 HMGN5P82970 282 aaKnown RBP24.58■■□□□ 1.53
SNX3-201ENST00000230085 RIC3Q7Z5B4 369 aa24.58■■□□□ 1.53
SNX3-201ENST00000230085 MTFR1LQ9H019 292 aa24.58■■□□□ 1.53
SNX3-201ENST00000230085 SCN7AQ01118 1682 aa24.58■■□□□ 1.53
SNX3-201ENST00000230085 NUP98P52948 1817 aa24.57■■□□□ 1.52
SNX3-201ENST00000230085 RAB11FIP3O75154 756 aa24.57■■□□□ 1.52
SNX3-201ENST00000230085 DDX58O95786 925 aaKnown RBP24.57■■□□□ 1.52
SNX3-201ENST00000230085 TBC1D9BQ66K14 1250 aa24.57■■□□□ 1.52
SNX3-201ENST00000230085 CLEC4GQ6UXB4 293 aa24.57■■□□□ 1.52
SNX3-201ENST00000230085 GIGYF2Q6Y7W6 1299 aaKnown RBP24.57■■□□□ 1.52
SNX3-201ENST00000230085 NLGN1Q8N2Q7 840 aa24.57■■□□□ 1.52
SNX3-201ENST00000230085 SPTLC3Q9NUV7 552 aa24.57■■□□□ 1.52
SNX3-201ENST00000230085 KSR2Q6VAB6 950 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms