RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 EHBP1Q8NDI1 1231 aa10.19□□□□□ -0.78
CCL1-201ENST00000225842 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.19□□□□□ -0.78
CCL1-201ENST00000225842 RIMS2Q9UQ26 1411 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 CFAP65Q6ZU64 1925 aaKnown RBP10.18□□□□□ -0.78
CCL1-201ENST00000225842 A0A1W2PRU2 124 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 NDUFB5O43674 189 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 NPR3P17342 541 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 RBCK1Q9BYM8 510 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 CEP152O94986 1710 aa10.18□□□□□ -0.78
CCL1-201ENST00000225842 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
CCL1-201ENST00000225842 ADGRB3O60242 1522 aa10.17□□□□□ -0.78
CCL1-201ENST00000225842 ZFYVE9O95405 1425 aa10.17□□□□□ -0.78
CCL1-201ENST00000225842 RNF223E7ERA6 249 aa10.17□□□□□ -0.78
CCL1-201ENST00000225842 WASLO00401 505 aaPredicted RBP10.17□□□□□ -0.78
CCL1-201ENST00000225842 WNT7BP56706 349 aa10.17□□□□□ -0.78
CCL1-201ENST00000225842 COL19A1Q14993 1142 aa10.17□□□□□ -0.78
CCL1-201ENST00000225842 BRPF3Q9ULD4 1205 aa10.17□□□□□ -0.78
CCL1-201ENST00000225842 TLL2Q9Y6L7 1015 aa10.17□□□□□ -0.78
CCL1-201ENST00000225842 AAMPQ13685 434 aa10.16□□□□□ -0.78
CCL1-201ENST00000225842 SLC9A9Q8IVB4 645 aa10.16□□□□□ -0.78
CCL1-201ENST00000225842 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
CCL1-201ENST00000225842 RAB6BQ9NRW1 208 aa10.16□□□□□ -0.78
CCL1-201ENST00000225842 ARHGEF5Q12774 1597 aa10.16□□□□□ -0.78
CCL1-201ENST00000225842 CHD2O14647 1828 aaKnown RBP10.16□□□□□ -0.78
CCL1-201ENST00000225842 ADAMTS13Q76LX8 1427 aa10.16□□□□□ -0.78
CCL1-201ENST00000225842 SOS2Q07890 1332 aaPredicted RBP10.15□□□□□ -0.78
CCL1-201ENST00000225842 DHX9Q08211 1270 aaKnown RBP10.15□□□□□ -0.78
CCL1-201ENST00000225842 UNC5CLQ8IV45 518 aa10.15□□□□□ -0.78
CCL1-201ENST00000225842 RRP7BPQ9NSQ0 103 aa10.15□□□□□ -0.78
CCL1-201ENST00000225842 CCDC87Q9NVE4 849 aa10.15□□□□□ -0.78
CCL1-201ENST00000225842 EHBP1L1Q8N3D4 1523 aa10.15□□□□□ -0.78
CCL1-201ENST00000225842 NOS1P29475 1434 aa10.15□□□□□ -0.79
CCL1-201ENST00000225842 DUOX2Q9NRD8 1548 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 GRM5P41594 1212 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 EIF1AXP47813 144 aaKnown RBP10.14□□□□□ -0.79
CCL1-201ENST00000225842 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 KRT27Q7Z3Y8 459 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 CYP2U1Q7Z449 544 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 CDK15Q96Q40 435 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 SLC4A9Q96Q91 983 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCL1-201ENST00000225842 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
CCL1-201ENST00000225842 RALGAPBQ86X10 1494 aa10.13□□□□□ -0.79
CCL1-201ENST00000225842 LILRA1O75019 489 aa10.13□□□□□ -0.79
CCL1-201ENST00000225842 FOXK2Q01167 660 aa10.13□□□□□ -0.79
CCL1-201ENST00000225842 MYT1Q01538 1121 aa10.13□□□□□ -0.79
CCL1-201ENST00000225842 COX20Q5RI15 118 aa10.13□□□□□ -0.79
CCL1-201ENST00000225842 RC3H1Q5TC82 1133 aaKnown RBP10.13□□□□□ -0.79
CCL1-201ENST00000225842 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
CCL1-201ENST00000225842 SCHIP1Q9P0W5 487 aaPredicted RBP10.13□□□□□ -0.79
CCL1-201ENST00000225842 PPP1R1BQ9UD71 204 aaPredicted RBP10.13□□□□□ -0.79
CCL1-201ENST00000225842 PTPRUQ92729 1446 aa10.13□□□□□ -0.79
CCL1-201ENST00000225842 A6NJY4 79 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 TNFRSF10BO14763 440 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 TREHO43280 583 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 GNRH1P01148 92 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 ESCO1Q5FWF5 840 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 PPP1R26Q5T8A7 1209 aaPredicted RBP10.12□□□□□ -0.79
CCL1-201ENST00000225842 ORAI2Q96SN7 254 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 C2orf49Q9BVC5 232 aaPredicted RBP10.12□□□□□ -0.79
CCL1-201ENST00000225842 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 UNC13BO14795 1591 aa10.12□□□□□ -0.79
CCL1-201ENST00000225842 ERBINQ96RT1 1412 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 FZD6O60353 706 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 ADD1P35611 737 aaKnown RBP10.11□□□□□ -0.79
CCL1-201ENST00000225842 MAPK8P45983 427 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 SMTNP53814 917 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 KCNC4Q03721 635 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 FMR1Q06787 632 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCL1-201ENST00000225842 CCDC116Q8IYX3 515 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 STIM2Q9P246 746 aa10.11□□□□□ -0.79
CCL1-201ENST00000225842 A0A0G2JS52 829 aa10.1□□□□□ -0.79
CCL1-201ENST00000225842 ALKBH2Q6NS38 261 aa10.1□□□□□ -0.79
CCL1-201ENST00000225842 FAM161BQ96MY7 647 aa10.1□□□□□ -0.79
CCL1-201ENST00000225842 USP3Q9Y6I4 520 aa10.1□□□□□ -0.79
CCL1-201ENST00000225842 C1orf167Q5SNV9 1468 aa10.1□□□□□ -0.79
CCL1-201ENST00000225842 VPS8Q8N3P4 1428 aa10.09□□□□□ -0.79
CCL1-201ENST00000225842 TRPM2O94759 1503 aa10.09□□□□□ -0.79
CCL1-201ENST00000225842 GGCXP38435 758 aa10.09□□□□□ -0.79
CCL1-201ENST00000225842 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
CCL1-201ENST00000225842 MRPL58Q14197 206 aaKnown RBP10.09□□□□□ -0.79
CCL1-201ENST00000225842 PRKD2Q9BZL6 878 aa10.09□□□□□ -0.79
CCL1-201ENST00000225842 LRFN2Q9ULH4 789 aa10.09□□□□□ -0.79
CCL1-201ENST00000225842 MYOM2P54296 1465 aa10.09□□□□□ -0.79
CCL1-201ENST00000225842 ADGRL3Q9HAR2 1447 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 LMTK2Q8IWU2 1503 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 ADH1CP00326 375 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 LDHBP07195 334 aaKnown RBP10.08□□□□□ -0.8
CCL1-201ENST00000225842 RPIAP49247 311 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 PSMA6P60900 246 aaKnown RBP10.08□□□□□ -0.8
CCL1-201ENST00000225842 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
CCL1-201ENST00000225842 EHHADHQ08426 723 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 MTFR1Q15390 333 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 ATCAYQ86WG3 371 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
CCL1-201ENST00000225842 RPRD2Q5VT52 1461 aaKnown RBP10.07□□□□□ -0.8
CCL1-201ENST00000225842 ZBTB39O15060 712 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms