RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 IFIT5Q13325 482 aaKnown RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 CALM1P0DP23 149 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 CALM2P0DP24 149 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 CALM3P0DP25 149 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 JAKMIP2Q96AA8 810 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 SWAP70Q9UH65 585 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 CHD1O14646 1710 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 IBTKQ9P2D0 1353 aaPredicted RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 NOLC1Q14978 699 aaKnown RBP eCLIP5.06□□□□□ -1.6
CHD9-201ENST00000219084 LRP2BPQ9P2M1 347 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 UQCRFS1P1P0C7P4 283 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 SSFA2P28290 1259 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 GNAQP50148 359 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 SYTL4Q96C24 671 aaPredicted RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 MSH6P52701 1360 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 SBNO2Q9Y2G9 1366 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 ARHGAP31Q2M1Z3 1444 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 HOXA7P31268 230 aaPredicted RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 GABPB1Q06547 395 aaPredicted RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 PDE4CQ08493 712 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 ERMNQ8TAM6 284 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 C16orf45Q96MC5 204 aaPredicted RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 CENPHQ9H3R5 247 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 NUP133Q8WUM0 1156 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 CUL5Q93034 780 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 UHRF1BP1LA0JNW5 1464 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 SLU7O95391 586 aaKnown RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 HSPA4P34932 840 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 C8orf34Q49A92 452 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 B4GALNT4Q76KP1 1039 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 NEK1Q96PY6 1258 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 HOXB7P09629 217 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 SH3BGRP55822 239 aaPredicted RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 CNGA4Q8IV77 575 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 CCDC155Q8N6L0 562 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 MRPS27Q92552 414 aaKnown RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 TBC1D5Q92609 795 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 STRN4Q9NRL3 753 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 FLT4P35916 1363 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 CCDC194A0A1B0GVG4 234 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 KRT86O43790 486 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 CALML3P27482 149 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 CAMK4Q16566 473 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 NAP1L4Q99733 375 aaKnown RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 ESYT1Q9BSJ8 1104 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 FAM135BQ49AJ0 1406 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 RIMS2Q9UQ26 1411 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 URI1O94763 535 aaPredicted RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 F13A1P00488 732 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 ATP5DP30049 168 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 SYKP43405 635 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 METTL24Q5JXM2 366 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 TMC6Q7Z403 805 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 NAP1L3Q99457 506 aaPredicted RBP5.05□□□□□ -1.6
CHD9-201ENST00000219084 NPATQ14207 1427 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 HECW2Q9P2P5 1572 aa5.05□□□□□ -1.6
CHD9-201ENST00000219084 ZNF445P59923 1031 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 SAMD9LQ8IVG5 1584 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 ZC3H13Q5T200 1668 aaKnown RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 FYB1O15117 783 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 NBPF7P0C2Y1 421 aaPredicted RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 PPP2R5BQ15173 497 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 BICDL1Q6ZP65 573 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 HDXQ7Z353 690 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 ARFGAP2Q8N6H7 521 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 TMX3Q96JJ7 454 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 SIL1Q9H173 461 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 CWC25Q9NXE8 425 aaPredicted RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 EXOC6BQ9Y2D4 811 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 CTAGE15A4D2H0 777 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 CTAGE8P0CG41 777 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 METAP2P50579 478 aaKnown RBP eCLIP5.04□□□□□ -1.6
CHD9-201ENST00000219084 CTAGE6Q86UF2 777 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 CTAGE4Q8IX94 777 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.04□□□□□ -1.6
CHD9-201ENST00000219084 SPATS2Q86XZ4 545 aaKnown RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 RPGRIP1Q96KN7 1286 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 ELP1O95163 1332 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 CAMSAP1Q5T5Y3 1602 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 VAV2P52735 878 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 UBASH3AP57075 661 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 TMEM132AQ24JP5 1023 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 MFSD6Q6ZSS7 791 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 LRRC45Q96CN5 670 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 EXOC1Q9NV70 894 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 RBM28Q9NW13 759 aaKnown RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 BAG3O95817 575 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 ZNF76P36508 570 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 IARSP41252 1262 aaKnown RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 CDC5LQ99459 802 aaKnown RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 MPHOSPH6Q99547 160 aaKnown RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 DCTPP1Q9H773 170 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 MBIPQ9NS73 344 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 MAP3K4Q9Y6R4 1608 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 XPCQ01831 940 aaPredicted RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 MEX3CQ5U5Q3 659 aaKnown RBP5.04□□□□□ -1.6
CHD9-201ENST00000219084 TICAM2Q86XR7 235 aa5.04□□□□□ -1.6
CHD9-201ENST00000219084 ANKRD62A6NC57 917 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 XRCC6P12956 609 aaKnown RBP eCLIP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms