RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 KIF2CQ99661 725 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 LARP1Q6PKG0 1096 aaKnown RBP12.92□□□□□ -0.34
APOBEC3D-201ENST00000216099 LRP6O75581 1613 aa12.92□□□□□ -0.34
APOBEC3D-201ENST00000216099 TNS2Q63HR2 1409 aa12.92□□□□□ -0.34
APOBEC3D-201ENST00000216099 SRGAP3O43295 1099 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 IL2RBP14784 551 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 ABL2P42684 1182 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 LRP10Q7Z4F1 713 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 KIF1BPQ96EK5 621 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 COL15A1P39059 1388 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 ANAPC15P60006 121 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 TJP1Q07157 1748 aa12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
APOBEC3D-201ENST00000216099 GRM8O00222 908 aa12.9□□□□□ -0.34
APOBEC3D-201ENST00000216099 REC8O95072 547 aa12.9□□□□□ -0.34
APOBEC3D-201ENST00000216099 MAP2K5Q13163 448 aa12.9□□□□□ -0.34
APOBEC3D-201ENST00000216099 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
APOBEC3D-201ENST00000216099 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
APOBEC3D-201ENST00000216099 SURF6O75683 361 aaKnown RBP12.9□□□□□ -0.34
APOBEC3D-201ENST00000216099 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.34
APOBEC3D-201ENST00000216099 ERC2O15083 957 aa12.89□□□□□ -0.35
APOBEC3D-201ENST00000216099 NCLP19338 710 aaKnown RBP12.89□□□□□ -0.35
APOBEC3D-201ENST00000216099 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
APOBEC3D-201ENST00000216099 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
APOBEC3D-201ENST00000216099 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
APOBEC3D-201ENST00000216099 APBB1IPQ7Z5R6 666 aaPredicted RBP12.89□□□□□ -0.35
APOBEC3D-201ENST00000216099 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
APOBEC3D-201ENST00000216099 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 RABEP1Q15276 862 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 MTMR14Q8NCE2 650 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 XAGE3Q8WTP9 111 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 SCNN1AP37088 669 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 USTQ9Y2C2 406 aa12.88□□□□□ -0.35
APOBEC3D-201ENST00000216099 NEURL1BA8MQ27 555 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 EPB41L2O43491 1005 aaKnown RBP12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 PLCD4Q9BRC7 762 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 USP16Q9Y5T5 823 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 EVA1CP58658 441 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 FAM43BQ6ZT52 329 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 COPS6Q7L5N1 327 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 UBXN4Q92575 508 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 SLKQ9H2G2 1235 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 CHMP5Q9NZZ3 219 aa12.87□□□□□ -0.35
APOBEC3D-201ENST00000216099 TTC41PQ6P2S7 1318 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 PARNO95453 639 aaKnown RBP12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 DDIT3P35638 169 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 AIMP1Q12904 312 aaKnown RBP12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 SUCLG2Q96I99 432 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 SSUH2Q9Y2M2 353 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 MYL6BP14649 208 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 GCKRQ14397 625 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 KAZALD1Q96I82 304 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
APOBEC3D-201ENST00000216099 ABCB7O75027 752 aa12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 PLBD2Q8NHP8 589 aa12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 PI4K2BQ8TCG2 481 aa12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 NWD2Q9ULI1 1742 aa12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 CHMLP26374 656 aa12.85□□□□□ -0.35
APOBEC3D-201ENST00000216099 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 DPYSL4O14531 572 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 IL17RAQ96F46 866 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 MYD88Q99836 296 aa12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 BICC1Q9H694 974 aaKnown RBP12.84□□□□□ -0.35
APOBEC3D-201ENST00000216099 TSHZ3Q63HK5 1081 aa12.83□□□□□ -0.36
APOBEC3D-201ENST00000216099 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
APOBEC3D-201ENST00000216099 DOT1LQ8TEK3 1739 aa12.83□□□□□ -0.36
APOBEC3D-201ENST00000216099 OS9Q13438 667 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3D-201ENST00000216099 CLASRPQ8N2M8 674 aaKnown RBP12.83□□□□□ -0.36
APOBEC3D-201ENST00000216099 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
APOBEC3D-201ENST00000216099 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
APOBEC3D-201ENST00000216099 GLRX3O76003 335 aaKnown RBP12.82□□□□□ -0.36
APOBEC3D-201ENST00000216099 RECKO95980 971 aa12.82□□□□□ -0.36
APOBEC3D-201ENST00000216099 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
APOBEC3D-201ENST00000216099 IPO4Q8TEX9 1081 aaKnown RBP12.82□□□□□ -0.36
APOBEC3D-201ENST00000216099 CICQ96RK0 1608 aaPredicted RBP12.82□□□□□ -0.36
APOBEC3D-201ENST00000216099 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
APOBEC3D-201ENST00000216099 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms