RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 CDHR2Q9BYE9 1310 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 PRR5LQ6MZQ0 368 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 HDAC5Q9UQL6 1122 aa12.38□□□□□ -0.43
RTCB-201ENST00000216038 TAF1P21675 1872 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 HDAC1Q13547 482 aaPredicted RBP12.37□□□□□ -0.43
RTCB-201ENST00000216038 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
RTCB-201ENST00000216038 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
RTCB-201ENST00000216038 PDE8AO60658 829 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 CTSWP56202 376 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
RTCB-201ENST00000216038 SKAP1Q86WV1 359 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 SIL1Q9H173 461 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 EXOC6BQ9Y2D4 811 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 PARP3Q9Y6F1 533 aa12.37□□□□□ -0.43
RTCB-201ENST00000216038 KDM2BQ8NHM5 1336 aa12.36□□□□□ -0.43
RTCB-201ENST00000216038 HMMRO75330 724 aa12.36□□□□□ -0.43
RTCB-201ENST00000216038 MTX1Q13505 466 aa12.36□□□□□ -0.43
RTCB-201ENST00000216038 SSH3Q8TE77 659 aa12.36□□□□□ -0.43
RTCB-201ENST00000216038 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
RTCB-201ENST00000216038 GREM2Q9H772 168 aa12.36□□□□□ -0.43
RTCB-201ENST00000216038 LAMB2P55268 1798 aa12.36□□□□□ -0.43
RTCB-201ENST00000216038 PLA2G12BQ9BX93 195 aa12.35□□□□□ -0.43
RTCB-201ENST00000216038 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
RTCB-201ENST00000216038 POLA2Q14181 598 aa12.35□□□□□ -0.43
RTCB-201ENST00000216038 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
RTCB-201ENST00000216038 SURF6O75683 361 aaKnown RBP12.34□□□□□ -0.43
RTCB-201ENST00000216038 CSF1RP07333 972 aa12.34□□□□□ -0.43
RTCB-201ENST00000216038 ITGA6P23229 1130 aa12.34□□□□□ -0.43
RTCB-201ENST00000216038 ST5P78524 1137 aa12.34□□□□□ -0.43
RTCB-201ENST00000216038 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
RTCB-201ENST00000216038 CENPQQ7L2Z9 268 aaPredicted RBP12.34□□□□□ -0.43
RTCB-201ENST00000216038 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.43
RTCB-201ENST00000216038 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.43
RTCB-201ENST00000216038 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.43
RTCB-201ENST00000216038 NLRP3Q96P20 1036 aa12.33□□□□□ -0.43
RTCB-201ENST00000216038 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
RTCB-201ENST00000216038 IFIT5Q13325 482 aaKnown RBP12.33□□□□□ -0.44
RTCB-201ENST00000216038 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
RTCB-201ENST00000216038 COL4A1P02462 1669 aa12.33□□□□□ -0.44
RTCB-201ENST00000216038 ANKRD31Q8N7Z5 1873 aa12.33□□□□□ -0.44
RTCB-201ENST00000216038 SPEF2Q9C093 1822 aa12.33□□□□□ -0.44
RTCB-201ENST00000216038 NRXN2Q9P2S2 1712 aa12.32□□□□□ -0.44
RTCB-201ENST00000216038 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
RTCB-201ENST00000216038 HSP90B1P14625 803 aaKnown RBP12.32□□□□□ -0.44
RTCB-201ENST00000216038 OS9Q13438 667 aaPredicted RBP12.32□□□□□ -0.44
RTCB-201ENST00000216038 CCDC152Q4G0S7 254 aa12.32□□□□□ -0.44
RTCB-201ENST00000216038 TAF7LQ5H9L4 462 aa12.32□□□□□ -0.44
RTCB-201ENST00000216038 ANKRD45Q5TZF3 282 aa12.32□□□□□ -0.44
RTCB-201ENST00000216038 SMC5Q8IY18 1101 aa12.32□□□□□ -0.44
RTCB-201ENST00000216038 PUS3Q9BZE2 481 aaKnown RBP12.32□□□□□ -0.44
RTCB-201ENST00000216038 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
RTCB-201ENST00000216038 ANKRD18BA2A2Z9 1011 aa12.31□□□□□ -0.44
RTCB-201ENST00000216038 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
RTCB-201ENST00000216038 GCC1Q96CN9 775 aa12.31□□□□□ -0.44
RTCB-201ENST00000216038 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
RTCB-201ENST00000216038 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
RTCB-201ENST00000216038 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
RTCB-201ENST00000216038 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
RTCB-201ENST00000216038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
RTCB-201ENST00000216038 G3BP1Q13283 466 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■□□□ 14.5
RTCB-201ENST00000216038 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
RTCB-201ENST00000216038 COPRSQ9NQ92 184 aa12.3□□□□□ -0.44
RTCB-201ENST00000216038 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.3□□□□□ -0.44
RTCB-201ENST00000216038 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
RTCB-201ENST00000216038 SLC51AQ86UW1 340 aa12.29□□□□□ -0.44
RTCB-201ENST00000216038 RPGRQ92834 1020 aaKnown RBP12.29□□□□□ -0.44
RTCB-201ENST00000216038 CELF1Q92879 486 aaKnown RBP12.29□□□□□ -0.44
RTCB-201ENST00000216038 PPP1R1BQ9UD71 204 aaPredicted RBP12.29□□□□□ -0.44
RTCB-201ENST00000216038 POLD1P28340 1107 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 NUCB1Q02818 461 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
RTCB-201ENST00000216038 ATG9AQ7Z3C6 839 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 SASH1O94885 1247 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 CHRNA5P30532 468 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 CRY2Q49AN0 593 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 C16orf71Q8IYS4 520 aaPredicted RBP12.28□□□□□ -0.44
RTCB-201ENST00000216038 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 COL11A2P13942 1736 aaPredicted RBP12.28□□□□□ -0.44
RTCB-201ENST00000216038 CACNA1SQ13698 1873 aa12.28□□□□□ -0.44
RTCB-201ENST00000216038 EYA2O00167 538 aa12.27□□□□□ -0.44
RTCB-201ENST00000216038 RGS3P49796 1198 aa12.27□□□□□ -0.44
RTCB-201ENST00000216038 TFCP2Q12800 502 aa12.27□□□□□ -0.44
RTCB-201ENST00000216038 GLIPR1L2Q4G1C9 344 aa12.27□□□□□ -0.44
RTCB-201ENST00000216038 CHD1LQ86WJ1 897 aa12.27□□□□□ -0.44
RTCB-201ENST00000216038 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.44
RTCB-201ENST00000216038 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.44
RTCB-201ENST00000216038 PKNOX2Q96KN3 472 aa12.27□□□□□ -0.44
RTCB-201ENST00000216038 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.44
RTCB-201ENST00000216038 SRGNP10124 158 aa12.27□□□□□ -0.45
RTCB-201ENST00000216038 PDE6BP35913 854 aa12.27□□□□□ -0.45
RTCB-201ENST00000216038 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.45
RTCB-201ENST00000216038 PTGER2P43116 358 aa12.27□□□□□ -0.45
RTCB-201ENST00000216038 HSP90AB4PQ58FF6 505 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms