RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 LRRC2Q9BYS8 371 aa24.02■■□□□ 1.44
RCN1-201ENST00000054950 MYL6BP14649 208 aa24.02■■□□□ 1.44
RCN1-201ENST00000054950 GOLGA6L6A8MZA4 724 aa24.01■■□□□ 1.43
RCN1-201ENST00000054950 PDCP20941 246 aa24.01■■□□□ 1.43
RCN1-201ENST00000054950 CEBPZQ03701 1054 aaKnown RBP24.01■■□□□ 1.43
RCN1-201ENST00000054950 DNAJC25Q9H1X3 360 aa24.01■■□□□ 1.43
RCN1-201ENST00000054950 HIP1O00291 1037 aa24.01■■□□□ 1.43
RCN1-201ENST00000054950 SLC39A6Q13433 755 aa24.01■■□□□ 1.43
RCN1-201ENST00000054950 RNF20Q5VTR2 975 aa24.01■■□□□ 1.43
RCN1-201ENST00000054950 BICD2Q8TD16 824 aa24.01■■□□□ 1.43
RCN1-201ENST00000054950 SEC62Q99442 399 aaKnown RBP24.01■■□□□ 1.43
RCN1-201ENST00000054950 PIP4K2AP48426 406 aaPredicted RBP24■■□□□ 1.43
RCN1-201ENST00000054950 SMAP1Q8IYB5 467 aaPredicted RBP24■■□□□ 1.43
RCN1-201ENST00000054950 TRIM5Q9C035 493 aa24■■□□□ 1.43
RCN1-201ENST00000054950 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
RCN1-201ENST00000054950 PPFIA3O75145 1194 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 TAF5LO75529 589 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 PSME1Q06323 249 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 ESCO1Q5FWF5 840 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 BRF1Q92994 677 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 C16orf45Q96MC5 204 aaPredicted RBP23.99■■□□□ 1.43
RCN1-201ENST00000054950 BCL11BQ9C0K0 894 aaPredicted RBP23.99■■□□□ 1.43
RCN1-201ENST00000054950 PDIA6Q15084 440 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 RIC3Q7Z5B4 369 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 SCAND2PQ9GZW5 306 aaPredicted RBP23.99■■□□□ 1.43
RCN1-201ENST00000054950 SNRKQ9NRH2 765 aa23.99■■□□□ 1.43
RCN1-201ENST00000054950 SPDYE4A6NLX3 237 aa23.98■■□□□ 1.43
RCN1-201ENST00000054950 ANKRD1Q15327 319 aa23.98■■□□□ 1.43
RCN1-201ENST00000054950 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
RCN1-201ENST00000054950 CHMP4AQ9BY43 222 aa23.98■■□□□ 1.43
RCN1-201ENST00000054950 CLSTN2Q9H4D0 955 aa23.98■■□□□ 1.43
RCN1-201ENST00000054950 NPHP3Q7Z494 1330 aa23.98■■□□□ 1.43
RCN1-201ENST00000054950 A0A087WWV3 80 aa23.98■■□□□ 1.43
RCN1-201ENST00000054950 CHAF1AQ13111 956 aaPredicted RBP23.98■■□□□ 1.43
RCN1-201ENST00000054950 LMOD2Q6P5Q4 547 aa23.98■■□□□ 1.43
RCN1-201ENST00000054950 FTOQ9C0B1 505 aaKnown RBP eCLIP23.98■■□□□ 1.43
RCN1-201ENST00000054950 TPM3P06753 285 aa23.97■■□□□ 1.43
RCN1-201ENST00000054950 ZNF75DP51815 510 aa23.97■■□□□ 1.43
RCN1-201ENST00000054950 HEG1Q9ULI3 1381 aa23.97■■□□□ 1.43
RCN1-201ENST00000054950 HSP90B1P14625 803 aaKnown RBP23.97■■□□□ 1.43
RCN1-201ENST00000054950 SLFNL1Q499Z3 407 aa23.97■■□□□ 1.43
RCN1-201ENST00000054950 DBNLQ9UJU6 430 aaKnown RBP23.97■■□□□ 1.43
RCN1-201ENST00000054950 UTYO14607 1347 aa23.96■■□□□ 1.43
RCN1-201ENST00000054950 Q6ZUG5 572 aa23.96■■□□□ 1.43
RCN1-201ENST00000054950 MYD88Q99836 296 aa23.96■■□□□ 1.43
RCN1-201ENST00000054950 DDX19AQ9NUU7 478 aaKnown RBP23.96■■□□□ 1.43
RCN1-201ENST00000054950 ZHX1Q9UKY1 873 aaPredicted RBP23.96■■□□□ 1.43
RCN1-201ENST00000054950 ZNF165P49910 485 aa23.96■■□□□ 1.43
RCN1-201ENST00000054950 RESTQ13127 1097 aa23.96■■□□□ 1.43
RCN1-201ENST00000054950 GTF3C6Q969F1 213 aa23.96■■□□□ 1.43
RCN1-201ENST00000054950 DNAJC2Q99543 621 aaKnown RBP23.96■■□□□ 1.43
RCN1-201ENST00000054950 DDX21Q9NR30 783 aaKnown RBP eCLIP23.96■■□□□ 1.43
RCN1-201ENST00000054950 CCDC144BQ3MJ40 725 aa23.95■■□□□ 1.42
RCN1-201ENST00000054950 PLA2G4DQ86XP0 818 aa23.95■■□□□ 1.42
RCN1-201ENST00000054950 CCDC144CPQ8IYA2 1237 aa23.95■■□□□ 1.42
RCN1-201ENST00000054950 PDCL2Q8N4E4 241 aa23.95■■□□□ 1.42
RCN1-201ENST00000054950 ZSCAN25Q6NSZ9 544 aa23.95■■□□□ 1.42
RCN1-201ENST00000054950 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.42
RCN1-201ENST00000054950 NEURL1BA8MQ27 555 aa23.94■■□□□ 1.42
RCN1-201ENST00000054950 DDX58O95786 925 aaKnown RBP23.94■■□□□ 1.42
RCN1-201ENST00000054950 U2AF2P26368 475 aaKnown RBP eCLIP23.94■■□□□ 1.42
RCN1-201ENST00000054950 AMOTQ4VCS5 1084 aa23.94■■□□□ 1.42
RCN1-201ENST00000054950 RBM43Q6ZSC3 357 aaKnown RBP23.94■■□□□ 1.42
RCN1-201ENST00000054950 NEK1Q96PY6 1258 aa23.94■■□□□ 1.42
RCN1-201ENST00000054950 AXIN2Q9Y2T1 843 aa23.94■■□□□ 1.42
RCN1-201ENST00000054950 TFCP2Q12800 502 aa23.94■■□□□ 1.42
RCN1-201ENST00000054950 XAGE3Q8WTP9 111 aa23.94■■□□□ 1.42
RCN1-201ENST00000054950 H3BQV1 296 aa23.93■■□□□ 1.42
RCN1-201ENST00000054950 IFFO2Q5TF58 517 aa23.93■■□□□ 1.42
RCN1-201ENST00000054950 HDAC5Q9UQL6 1122 aa23.93■■□□□ 1.42
RCN1-201ENST00000054950 JCADQ9P266 1359 aa23.93■■□□□ 1.42
RCN1-201ENST00000054950 ZNF609O15014 1411 aa23.93■■□□□ 1.42
RCN1-201ENST00000054950 ZSCAN20P17040 1043 aaPredicted RBP23.93■■□□□ 1.42
RCN1-201ENST00000054950 NAA30Q147X3 362 aaPredicted RBP23.93■■□□□ 1.42
RCN1-201ENST00000054950 ARID5BQ14865 1188 aa23.93■■□□□ 1.42
RCN1-201ENST00000054950 TDRD7Q8NHU6 1098 aaKnown RBP23.93■■□□□ 1.42
RCN1-201ENST00000054950 CACTINQ8WUQ7 758 aaKnown RBP23.93■■□□□ 1.42
RCN1-201ENST00000054950 GCP02774 474 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 CYP21A2P08686 494 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 C11orf57Q6ZUT1 292 aaPredicted RBP23.92■■□□□ 1.42
RCN1-201ENST00000054950 DDX46Q7L014 1031 aaKnown RBP23.92■■□□□ 1.42
RCN1-201ENST00000054950 COPS6Q7L5N1 327 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 HMG20BQ9P0W2 317 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 SCRN1Q12765 414 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 GCKRQ14397 625 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 KCNH5Q8NCM2 988 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 CLIP2Q9UDT6 1046 aa23.92■■□□□ 1.42
RCN1-201ENST00000054950 KLHL34Q8N239 644 aa23.91■■□□□ 1.42
RCN1-201ENST00000054950 ALDH8A1Q9H2A2 487 aaPredicted RBP23.91■■□□□ 1.42
RCN1-201ENST00000054950 STOX1Q6ZVD7 989 aa23.91■■□□□ 1.42
RCN1-201ENST00000054950 DBNDD2Q9BQY9 259 aa23.91■■□□□ 1.42
RCN1-201ENST00000054950 ADGRL3Q9HAR2 1447 aa23.91■■□□□ 1.42
RCN1-201ENST00000054950 TSGA10IPQ3SY00 556 aa23.9■■□□□ 1.42
RCN1-201ENST00000054950 USPL1Q5W0Q7 1092 aa23.9■■□□□ 1.42
RCN1-201ENST00000054950 ANKRD7Q92527 254 aa23.9■■□□□ 1.42
RCN1-201ENST00000054950 ERCC4Q92889 916 aaPredicted RBP23.9■■□□□ 1.42
RCN1-201ENST00000054950 A0A0G2JLW4 131 aa23.9■■□□□ 1.42
RCN1-201ENST00000054950 CTIFO43310 598 aaKnown RBP23.9■■□□□ 1.42
RCN1-201ENST00000054950 TNNI3KQ59H18 835 aa23.9■■□□□ 1.42
RCN1-201ENST00000054950 FPGT-TNNI3KV9GXZ4 949 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms