RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ZNF219Q9P2Y4 722 aaPredicted RBP26.71■■□□□ 1.87
TARBP1-201ENST00000040877 NIP7Q9Y221 180 aaKnown RBP eCLIP26.71■■□□□ 1.87
TARBP1-201ENST00000040877 TTLL12Q14166 644 aaPredicted RBP26.71■■□□□ 1.87
TARBP1-201ENST00000040877 PTPN14Q15678 1187 aa26.71■■□□□ 1.87
TARBP1-201ENST00000040877 SLC26A6Q9BXS9 759 aa26.71■■□□□ 1.87
TARBP1-201ENST00000040877 UBA5Q9GZZ9 404 aa26.71■■□□□ 1.87
TARBP1-201ENST00000040877 PCDH11XQ9BZA7 1347 aa26.71■■□□□ 1.87
TARBP1-201ENST00000040877 PCDH11YQ9BZA8 1340 aa26.71■■□□□ 1.87
TARBP1-201ENST00000040877 KIF5CO60282 957 aa26.71■■□□□ 1.87
TARBP1-201ENST00000040877 GSDMDP57764 484 aa26.71■■□□□ 1.87
TARBP1-201ENST00000040877 SKAP1Q86WV1 359 aa26.7■■□□□ 1.87
TARBP1-201ENST00000040877 FAM114A1Q8IWE2 563 aa26.7■■□□□ 1.87
TARBP1-201ENST00000040877 PCDHB15Q9Y5E8 787 aa26.7■■□□□ 1.87
TARBP1-201ENST00000040877 ZBTB43O43298 467 aa26.7■■□□□ 1.87
TARBP1-201ENST00000040877 VAMP4O75379 141 aa26.7■■□□□ 1.87
TARBP1-201ENST00000040877 RBM25P49756 843 aaKnown RBP26.7■■□□□ 1.87
TARBP1-201ENST00000040877 CCDC102BQ68D86 513 aa26.7■■□□□ 1.86
TARBP1-201ENST00000040877 TSHZ3Q63HK5 1081 aa26.7■■□□□ 1.86
TARBP1-201ENST00000040877 BRF1Q92994 677 aa26.7■■□□□ 1.86
TARBP1-201ENST00000040877 EYA1Q99502 592 aa26.7■■□□□ 1.86
TARBP1-201ENST00000040877 YEATS4O95619 227 aa26.69■■□□□ 1.86
TARBP1-201ENST00000040877 GNAT2P19087 354 aa26.69■■□□□ 1.86
TARBP1-201ENST00000040877 KLF18A0A0U1RQI7 1052 aa26.69■■□□□ 1.86
TARBP1-201ENST00000040877 TPTE2Q6XPS3 522 aa26.69■■□□□ 1.86
TARBP1-201ENST00000040877 CCDC150Q8NCX0 1101 aa26.69■■□□□ 1.86
TARBP1-201ENST00000040877 JARID2Q92833 1246 aaPredicted RBP26.69■■□□□ 1.86
TARBP1-201ENST00000040877 HDAC9Q9UKV0 1011 aa26.69■■□□□ 1.86
TARBP1-201ENST00000040877 DZIP3Q86Y13 1208 aaKnown RBP26.69■■□□□ 1.86
TARBP1-201ENST00000040877 CLIP2Q9UDT6 1046 aa26.69■■□□□ 1.86
TARBP1-201ENST00000040877 USO1O60763 962 aaKnown RBP26.68■■□□□ 1.86
TARBP1-201ENST00000040877 ZNF804AQ7Z570 1209 aa26.68■■□□□ 1.86
TARBP1-201ENST00000040877 NPC1L1Q9UHC9 1359 aa26.68■■□□□ 1.86
TARBP1-201ENST00000040877 HOXC9P31274 260 aa26.68■■□□□ 1.86
TARBP1-201ENST00000040877 NAA16Q6N069 864 aaPredicted RBP26.68■■□□□ 1.86
TARBP1-201ENST00000040877 CDCA7Q9BWT1 371 aaPredicted RBP26.68■■□□□ 1.86
TARBP1-201ENST00000040877 RBM27Q9P2N5 1060 aaKnown RBP26.68■■□□□ 1.86
TARBP1-201ENST00000040877 RBM8AQ9Y5S9 174 aaKnown RBP26.68■■□□□ 1.86
TARBP1-201ENST00000040877 NFATC2IPQ8NCF5 419 aa26.68■■□□□ 1.86
TARBP1-201ENST00000040877 TSPYL1Q9H0U9 437 aa26.68■■□□□ 1.86
TARBP1-201ENST00000040877 PDCL2Q8N4E4 241 aa26.68■■□□□ 1.86
TARBP1-201ENST00000040877 MPHOSPH6Q99547 160 aaKnown RBP26.67■■□□□ 1.86
TARBP1-201ENST00000040877 ZRANB1Q9UGI0 708 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 FBXO3Q9UK99 471 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 SLC4A4Q9Y6R1 1079 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 SIRT1Q96EB6 747 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 TMX3Q96JJ7 454 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 TFIP11Q9UBB9 837 aaKnown RBP26.67■■□□□ 1.86
TARBP1-201ENST00000040877 KCNA6P17658 529 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 KIF18AQ8NI77 898 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 DCTPP1Q9H773 170 aa26.67■■□□□ 1.86
TARBP1-201ENST00000040877 CKAP2LQ8IYA6 745 aa26.66■■□□□ 1.86
TARBP1-201ENST00000040877 NEBLO76041 1014 aa26.66■■□□□ 1.86
TARBP1-201ENST00000040877 TSPY3P0CV98 308 aa26.66■■□□□ 1.86
TARBP1-201ENST00000040877 TSPY8P0CW00 308 aa26.66■■□□□ 1.86
TARBP1-201ENST00000040877 STX8Q9UNK0 236 aa26.66■■□□□ 1.86
TARBP1-201ENST00000040877 ACSBG1Q96GR2 724 aa26.66■■□□□ 1.86
TARBP1-201ENST00000040877 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
TARBP1-201ENST00000040877 SSR1P43307 286 aaKnown RBP26.66■■□□□ 1.86
TARBP1-201ENST00000040877 DNMT1P26358 1616 aaKnown RBP26.66■■□□□ 1.86
TARBP1-201ENST00000040877 ZSCAN22P10073 491 aaPredicted RBP26.65■■□□□ 1.86
TARBP1-201ENST00000040877 WDR78Q5VTH9 848 aa26.65■■□□□ 1.86
TARBP1-201ENST00000040877 PLCG2P16885 1265 aa26.65■■□□□ 1.86
TARBP1-201ENST00000040877 IFIT1BQ5T764 474 aaKnown RBP26.65■■□□□ 1.86
TARBP1-201ENST00000040877 PAG1Q9NWQ8 432 aa26.65■■□□□ 1.86
TARBP1-201ENST00000040877 RMND1Q9NWS8 449 aa26.65■■□□□ 1.86
TARBP1-201ENST00000040877 SLC9C2Q5TAH2 1124 aa26.65■■□□□ 1.86
TARBP1-201ENST00000040877 CCDC144CPQ8IYA2 1237 aa26.65■■□□□ 1.86
TARBP1-201ENST00000040877 RNMTO43148 476 aaKnown RBP26.64■■□□□ 1.86
TARBP1-201ENST00000040877 MCM3P25205 808 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 MTIF2P46199 727 aaKnown RBP26.64■■□□□ 1.86
TARBP1-201ENST00000040877 UVSSAQ2YD98 709 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 MAP3K19Q56UN5 1328 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 ERMNQ8TAM6 284 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 ATP10AO60312 1499 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 KCNG4Q8TDN1 519 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 VAT1LQ9HCJ6 419 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 KLHL40Q2TBA0 621 aa26.64■■□□□ 1.86
TARBP1-201ENST00000040877 EDC4Q6P2E9 1401 aaKnown RBP26.64■■□□□ 1.85
TARBP1-201ENST00000040877 HOXB7P09629 217 aa26.64■■□□□ 1.85
TARBP1-201ENST00000040877 RTN1Q16799 776 aa26.64■■□□□ 1.85
TARBP1-201ENST00000040877 NUP88Q99567 741 aaPredicted RBP26.64■■□□□ 1.85
TARBP1-201ENST00000040877 CARD14Q9BXL6 1004 aa26.64■■□□□ 1.85
TARBP1-201ENST00000040877 RTCBQ9Y3I0 505 aaKnown RBP26.64■■□□□ 1.85
TARBP1-201ENST00000040877 IDEP14735 1019 aa26.63■■□□□ 1.85
TARBP1-201ENST00000040877 LARP6Q9BRS8 491 aaKnown RBP26.63■■□□□ 1.85
TARBP1-201ENST00000040877 RAD50Q92878 1312 aa26.63■■□□□ 1.85
TARBP1-201ENST00000040877 CALM1P0DP23 149 aa26.63■■□□□ 1.85
TARBP1-201ENST00000040877 CALM2P0DP24 149 aa26.63■■□□□ 1.85
TARBP1-201ENST00000040877 CALM3P0DP25 149 aa26.63■■□□□ 1.85
TARBP1-201ENST00000040877 DDX21Q9NR30 783 aaKnown RBP eCLIP26.63■■□□□ 1.85
TARBP1-201ENST00000040877 ANKRD2Q9GZV1 360 aa26.63■■□□□ 1.85
TARBP1-201ENST00000040877 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
TARBP1-201ENST00000040877 CEP85Q6P2H3 762 aa26.62■■□□□ 1.85
TARBP1-201ENST00000040877 OGFOD1Q8N543 542 aa26.62■■□□□ 1.85
TARBP1-201ENST00000040877 COL17A1Q9UMD9 1497 aaPredicted RBP26.62■■□□□ 1.85
TARBP1-201ENST00000040877 C8orf37Q96NL8 207 aa26.62■■□□□ 1.85
TARBP1-201ENST00000040877 ADGRL2O95490 1459 aa26.62■■□□□ 1.85
TARBP1-201ENST00000040877 SBNO1A3KN83 1393 aa26.62■■□□□ 1.85
TARBP1-201ENST00000040877 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
TARBP1-201ENST00000040877 GOLGA6L7A0A1B0GV03 622 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms