RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 ERVK-7P63135 1459 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 METP08581 1390 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 PICALMQ13492 652 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 MCMDC2Q4G0Z9 681 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 PPFIBP1Q86W92 1011 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 FLAD1Q8NFF5 587 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 CFAP65Q6ZU64 1925 aaKnown RBP12.05□□□□□ -0.48
NIPAL3-201ENST00000003912 CCP110O43303 1012 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 NUP62CLQ9H1M0 184 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 LGR6Q9HBX8 967 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 PAG1Q9NWQ8 432 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 METAP2P50579 478 aaKnown RBP eCLIP12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 CHMP4BP1P59074 171 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 SLC4A8Q2Y0W8 1093 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 TBC1D9Q6ZT07 1266 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 TXLNBQ8N3L3 684 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 H0YIN7 160 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 CBFA2T2O43439 604 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 PDE8AO60658 829 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 PDE1AP54750 535 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 WTAPQ15007 396 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 SCAND2PQ9GZW5 306 aaPredicted RBP12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 TNNI2P48788 182 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 FERMT3Q86UX7 667 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 HELBQ8NG08 1087 aaPredicted RBP12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 PAF1Q8N7H5 531 aa12.04□□□□□ -0.48
NIPAL3-201ENST00000003912 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 CCT2P78371 535 aaKnown RBP12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 FAM89AQ96GI7 184 aa12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 MICU3Q86XE3 530 aa12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 DNAJC10Q8IXB1 793 aa12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 MNS1Q8NEH6 495 aa12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 GNAQP50148 359 aa12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 BICC1Q9H694 974 aaKnown RBP12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 RBM26Q5T8P6 1007 aaKnown RBP12.03□□□□□ -0.48
NIPAL3-201ENST00000003912 CHL1O00533 1208 aa12.02□□□□□ -0.48
NIPAL3-201ENST00000003912 SBNO2Q9Y2G9 1366 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 UFL1O94874 794 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 DEF6Q9H4E7 631 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 KDM6BO15054 1643 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 A1BGP04217 495 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 TFCP2Q12800 502 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 IFIT1BQ5T764 474 aaKnown RBP12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 SUPT20HQ8NEM7 779 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 CAGE1Q8TC20 777 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
NIPAL3-201ENST00000003912 KDM5CP41229 1560 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 KIF20AO95235 890 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 ITGA6P23229 1130 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 RNF113AO15541 343 aaKnown RBP12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 DESP17661 470 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 IGHDP01880 384 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 HCLS1P14317 486 aaPredicted RBP12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 SDSP20132 328 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 ARID3AQ99856 593 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 ORC3Q9UBD5 711 aaPredicted RBP12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 MYO6Q9UM54 1294 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 INSRP06213 1382 aa12.01□□□□□ -0.49
NIPAL3-201ENST00000003912 PHKG2P15735 406 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 EYA2O00167 538 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 IBSPP21815 317 aaPredicted RBP12□□□□□ -0.49
NIPAL3-201ENST00000003912 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 TSG101Q99816 390 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 TCP11L1Q9NUJ3 509 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 ZNF496Q96IT1 587 aaPredicted RBP12□□□□□ -0.49
NIPAL3-201ENST00000003912 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
NIPAL3-201ENST00000003912 MAGEB6Q8N7X4 407 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 SLC26A6Q9BXS9 759 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 ZBTB43O43298 467 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 MAST3O60307 1309 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 HIBADHP31937 336 aaKnown RBP12□□□□□ -0.49
NIPAL3-201ENST00000003912 MYOM2P54296 1465 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 CCDC148Q8NFR7 591 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 DCTPP1Q9H773 170 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
NIPAL3-201ENST00000003912 RXRBP28702 533 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 DPP8Q6V1X1 898 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 CARD10Q9BWT7 1032 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 GJA3Q9Y6H8 435 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms