RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Nek11Q8C0Q4 628 aa12.41□□□□□ -0.42
Trim9-205ENSMUST00000221041 Kcnq3Q8K3F6 873 aa12.41□□□□□ -0.42
Trim9-205ENSMUST00000221041 Rufy2Q8R4C2 606 aa12.41□□□□□ -0.42
Trim9-205ENSMUST00000221041 Rreb1Q3UH06 1700 aaKnown RBP12.4□□□□□ -0.42
Trim9-205ENSMUST00000221041 Ccdc173A0JLY1 547 aa12.4□□□□□ -0.42
Trim9-205ENSMUST00000221041 Gas2l3Q3UWW6 683 aa12.4□□□□□ -0.42
Trim9-205ENSMUST00000221041 Miga2Q8BK03 593 aa12.4□□□□□ -0.42
Trim9-205ENSMUST00000221041 Tomm22Q9CPQ3 142 aa12.4□□□□□ -0.42
Trim9-205ENSMUST00000221041 TnrQ8BYI9 1358 aa12.4□□□□□ -0.42
Trim9-205ENSMUST00000221041 Trim34bJ3QNR8 485 aa12.4□□□□□ -0.43
Trim9-205ENSMUST00000221041 Pram1Q6BCL1 675 aa12.4□□□□□ -0.43
Trim9-205ENSMUST00000221041 Pdia6Q922R8 440 aaKnown RBP12.4□□□□□ -0.43
Trim9-205ENSMUST00000221041 Rapgef4Q9EQZ6 1011 aa12.4□□□□□ -0.43
Trim9-205ENSMUST00000221041 IncenpQ9WU62 880 aa12.4□□□□□ -0.43
Trim9-205ENSMUST00000221041 Slf2Q6P9P0 1278 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Abcc10Q8R4P9 1501 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Col15a1O35206 1367 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 RdxP26043 583 aaKnown RBP12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cd22P35329 862 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 FanccP50652 591 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 CebpzP53569 1052 aaKnown RBP12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ccdc129Q14B48 1034 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Prdm1Q60636 856 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Gm21985Q6P6P5 1106 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Zkscan8Q8BSL0 588 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Rrp9Q91WM3 475 aaKnown RBP12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Trim34aQ99PP6 485 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Odf2lQ9D478 642 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 4930407I10RikD3Z5T8 1512 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Znf541Q0GGX2 1363 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Eya2O08575 532 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cplx2P84086 134 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Myl10Q62082 202 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Zbtb40Q6PCS8 1258 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cep55Q8BT07 462 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Rec8Q8C5S7 591 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Wdr24Q8CFJ9 790 aa12.39□□□□□ -0.43
Trim9-205ENSMUST00000221041 Mdc1Q5PSV9 1707 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Exoc5Q3TPX4 708 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ripor2Q80U16 1078 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Rbm28Q8CGC6 750 aaKnown RBP12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 NgdnQ9DB96 315 aaKnown RBP12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 TnksQ6PFX9 1320 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Usp25P57080 1055 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Atp2b3Q0VF55 1220 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Wdr93Q402B2 695 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Trim56Q80VI1 734 aaKnown RBP12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 DymQ8CHY3 669 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Mapk8ip1Q9WVI9 707 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Zfp804bA0A0G2JGH6 1343 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Gm973E9Q295 1059 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Atp1a3Q6PIC6 1013 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Lrrc2Q8VDB8 371 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 ZgpatQ8VDM1 511 aa12.38□□□□□ -0.43
Trim9-205ENSMUST00000221041 Dctn1O08788 1281 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Hoxa7P02830 229 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Igbp1bQ9QZ29 343 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Pnpla7A2AJ88 1352 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 MypnQ5DTJ9 1315 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cavin1O54724 392 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ccdc82Q6PG04 518 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 U2af1l4Q8BGJ9 220 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Usp32F8VPZ3 1604 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Zkscan7E9PVW1 718 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Gm12185Q5NCB2 835 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Hmg20bQ9Z104 317 aa12.37□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cfap58B2RW38 873 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Pla2g4fQ50L41 855 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Msh6P54276 1358 aaKnown RBP12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 AceP09470 1312 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Wdr33Q8K4P0 1330 aaKnown RBP12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Fam184aE9PW83 1143 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Lnx1O70263 728 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cops6O88545 324 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ppp1r10Q80W00 888 aaKnown RBP12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Jmjd4Q8BFT6 427 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ccdc7Q9D541 371 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Itsn1Q9Z0R4 1714 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cul9Q80TT8 1865 aa12.36□□□□□ -0.43
Trim9-205ENSMUST00000221041 Gzf1Q4VBD9 706 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Leo1Q5XJE5 667 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Zscan22Q8BGS5 496 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ppm1mQ8BU27 406 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Gimap5Q8BWF2 308 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 StrbpQ91WM1 672 aaKnown RBP12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Rbm5Q91YE7 815 aaKnown RBP12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ccp110Q7TSH4 1004 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Nxf7Q80SZ6 620 aaKnown RBP12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Rbm19Q8R3C6 952 aaKnown RBP12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ubxn4Q8VCH8 506 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Mrpl44Q9CY73 333 aaKnown RBP12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 InsrrQ9WTL4 1300 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Tyro3P55144 880 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ifit1bl2Q3U687 466 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ell2Q3UKU1 639 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Srgap1Q91Z69 1062 aa12.35□□□□□ -0.43
Trim9-205ENSMUST00000221041 Pet2A2AHY8 747 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 EzrP26040 586 aaKnown RBP12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Cnot6lQ8VEG6 555 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ccdc47Q9D024 483 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms