RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Rbbp8nlA2ABX0 614 aa20.52■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Ttll7A4Q9F0 912 aa20.52■□□□□ 0.88
Ckap4-202ENSMUST00000167671 GpkowQ56A08 488 aa20.52■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Vps54Q5SPW0 977 aa20.52■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Zfp317Q8C0Q5 607 aa20.52■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Cnpy2Q9QXT0 182 aa20.52■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Taf7Q9R1C0 341 aa20.52■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Samd1D3YXK1 519 aa20.52■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Usp28Q5I043 1051 aa20.52■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Ccz1Q8C1Y8 480 aa20.52■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Tmem119Q8R138 280 aa20.52■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Cfap58B2RW38 873 aa20.51■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Ddx46Q569Z5 1032 aaKnown RBP20.51■□□□□ 0.87
Ckap4-202ENSMUST00000167671 DbnlQ62418 436 aa20.51■□□□□ 0.87
Ckap4-202ENSMUST00000167671 LratQ9JI60 231 aa20.51■□□□□ 0.87
Ckap4-202ENSMUST00000167671 AppP12023 770 aa20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Csrnp1P59054 583 aa20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Ppp1r10Q80W00 888 aaKnown RBP20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Rhot2Q8JZN7 620 aa20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Lrrfip2Q91WK0 415 aa20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Pcdhb15Q91Y04 786 aa20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Cct2P80314 535 aaKnown RBP20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Bmp2kQ91Z96 1138 aa20.5■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Tlcd1Q99JT6 247 aa20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Hmg20bQ9Z104 317 aa20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Hook1Q8BIL5 728 aa20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Tsen34Q8BMZ5 316 aa20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Slc39a6Q8C145 765 aa20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Pdia6Q922R8 440 aaKnown RBP20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Pus3Q9JI38 481 aa20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 PhaxQ9JJT9 385 aaKnown RBP20.49■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Cnnm1Q0GA42 951 aa20.48■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Q8C5K5 320 aa20.48■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Alpk3Q924C5 1678 aa20.48■□□□□ 0.87
Ckap4-202ENSMUST00000167671 NmiO35309 314 aa20.48■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Cdk4P30285 303 aa20.48■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Prkab2Q6PAM0 271 aa20.48■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Aox4Q3TYQ9 1336 aa20.48■□□□□ 0.87
Ckap4-202ENSMUST00000167671 BcorQ8CGN4 1759 aa20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Prl7a2O54831 253 aa20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Ppm1mQ8BU27 406 aa20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Hnrnpul1Q8VDM6 859 aaKnown RBP20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Osbpl5Q9ER64 874 aa20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Rims2Q9EQZ7 1530 aa20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Ercc3P49135 783 aa20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 CtifQ6PEE2 600 aaKnown RBP20.47■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Nlrp9bQ66X22 1003 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Nek11Q8C0Q4 628 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Gimap6Q8K349 305 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Kcnh5Q920E3 988 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Pdzd9Q9D9M4 266 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Tbc1d4Q8BYJ6 1307 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Ap5z1Q3U829 807 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Atp1a3Q6PIC6 1013 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 Ccdc158Q8CDI6 1109 aa20.46■□□□□ 0.87
Ckap4-202ENSMUST00000167671 RubcnlQ3TD16 648 aa20.45■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Dis3l2Q8CI75 870 aaKnown RBP20.45■□□□□ 0.86
Ckap4-202ENSMUST00000167671 TimelessQ9R1X4 1197 aa20.45■□□□□ 0.86
Ckap4-202ENSMUST00000167671 NpeppsQ11011 920 aa20.45■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Limch1Q3UH68 1057 aa20.45■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ncoa4Q5U4H9 625 aa20.45■□□□□ 0.86
Ckap4-202ENSMUST00000167671 TfrcQ62351 763 aaKnown RBP20.44■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Lmbrd2Q8C561 694 aa20.44■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Nfat5Q9WV30 1534 aa20.44■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Pes1Q9EQ61 584 aaKnown RBP20.44■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Nid2O88322 1403 aa20.43■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Dync1i1O88485 628 aa20.43■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Mtx1P47802 317 aa20.43■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Nxf7Q80SZ6 620 aaKnown RBP20.43■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Nfatc2ipO09130 412 aa20.43■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Dnaaf2Q8BPI1 814 aa20.43■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ubxn4Q8VCH8 506 aa20.43■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Zscan29E9Q5B4 869 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Chmp7Q8R1T1 451 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Tubb6Q922F4 447 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 PigbQ9JJQ0 542 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 C3P01027 1663 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Atp2b1G5E829 1220 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Cep135Q6P5D4 1140 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ube2oQ6ZPJ3 1288 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Lrrc8aQ80WG5 810 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Mtmr3Q8K296 1196 aa20.42■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Golim4Q8BXA1 655 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ccer1Q9CQL2 403 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Mrpl44Q9CY73 333 aaKnown RBP20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Dusp10Q9ESS0 483 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 InsrrQ9WTL4 1300 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Zfp397Q7TNK4 527 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Fsd1Q7TPM6 496 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Slu7Q8BHJ9 585 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Kcnk13Q8R1P5 405 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Dnajc14Q921R4 703 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Fam84aQ9D650 292 aa20.41■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ccdc112A0AUP1 442 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Stx1aO35526 288 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Frat1P70339 274 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ltv1Q6NSQ7 470 aaKnown RBP20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Soga3Q6NZL0 945 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Mb21d2Q8C525 428 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Pms1Q8K119 917 aa20.4■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms