RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 TefQ9JLC6 301 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ripor2Q80U16 1078 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Sh3bp5Q9Z131 463 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Krt85Q9Z2T6 507 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Scaf1Q5U4C3 1256 aaKnown RBP13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 TkfcQ8VC30 578 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Grpel1Q99LP6 217 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Prl7a2O54831 253 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Hmx1O70218 332 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Zfp317Q8C0Q5 607 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 Rhot2Q8JZN7 620 aa13.6□□□□□ -0.23
Vps54-202ENSMUST00000109578 InsrrQ9WTL4 1300 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Gm21698A0A087WQP8 267 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Gm21671G3UY31 267 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Lmbrd2Q8C561 694 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Dixdc1Q80Y83 711 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Sh3bgrQ9WUZ7 214 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 CrklP47941 303 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Timm10P62073 90 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Cct2P80314 535 aaKnown RBP13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ano6Q6P9J9 911 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 MsnP26041 577 aaKnown RBP13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 RubcnlQ3TD16 648 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Tbc1d8Q9Z1A9 1134 aa13.59□□□□□ -0.23
Vps54-202ENSMUST00000109578 Simc1E9Q6E9 1354 aa13.58□□□□□ -0.23
Vps54-202ENSMUST00000109578 Col14a1Q80X19 1797 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 1700113H08RikE9Q9Q5 327 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Ltv1Q6NSQ7 470 aaKnown RBP13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Asic4Q7TNS7 539 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Ccdc129Q14B48 1034 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Nek11Q8C0Q4 628 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Srgap1Q91Z69 1062 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Rrs1Q9CYH6 365 aaKnown RBP13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Atp8b3Q6UQ17 1335 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Cfap157Q0VFX2 523 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Golim4Q8BXA1 655 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Slain2Q8CI08 581 aa13.58□□□□□ -0.24
Vps54-202ENSMUST00000109578 Nxf2Q4ZGD8 691 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Ppp1r10Q80W00 888 aaKnown RBP13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Hmg20bQ9Z104 317 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Tpd52l1O54818 204 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Nucb2P81117 420 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Usp28Q5I043 1051 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Mb21d2Q8C525 428 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Cyp2d10P24456 504 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Kif3aP28741 701 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Zpr1Q62384 459 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Fkbp5Q64378 456 aa13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 PhaxQ9JJT9 385 aaKnown RBP13.57□□□□□ -0.24
Vps54-202ENSMUST00000109578 Ccdc158Q8CDI6 1109 aa13.56□□□□□ -0.24
Vps54-202ENSMUST00000109578 Tmem87bQ8BKU8 555 aa13.56□□□□□ -0.24
Vps54-202ENSMUST00000109578 Farp2Q91VS8 1065 aa13.56□□□□□ -0.24
Vps54-202ENSMUST00000109578 Nxf7Q80SZ6 620 aaKnown RBP13.56□□□□□ -0.24
Vps54-202ENSMUST00000109578 Pcdhb15Q91Y04 786 aa13.56□□□□□ -0.24
Vps54-202ENSMUST00000109578 Csrnp1P59054 583 aa13.56□□□□□ -0.24
Vps54-202ENSMUST00000109578 Ttc27Q8CD92 847 aa13.56□□□□□ -0.24
Vps54-202ENSMUST00000109578 Cspp1B2RX88 1205 aa13.55□□□□□ -0.24
Vps54-202ENSMUST00000109578 Chmp3Q9CQ10 224 aa13.55□□□□□ -0.24
Vps54-202ENSMUST00000109578 Rab3gap1Q80UJ7 981 aa13.55□□□□□ -0.24
Vps54-202ENSMUST00000109578 Ptcd1Q8C2E4 695 aaKnown RBP13.55□□□□□ -0.24
Vps54-202ENSMUST00000109578 Usp44Q8C2S0 711 aa13.55□□□□□ -0.24
Vps54-202ENSMUST00000109578 Nom1Q3UFM5 854 aaKnown RBP13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Gnat3Q3V3I2 354 aa13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Oas2E9Q9A9 742 aa13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Atp1a3Q6PIC6 1013 aa13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Nop14Q8R3N1 860 aaKnown RBP13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Ddx60E9PZQ1 1711 aa13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Arid5bQ8BM75 1188 aaKnown RBP13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Rbm17Q8JZX4 405 aaKnown RBP13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Fam13bQ8K2H3 851 aa13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Cnpy2Q9QXT0 182 aa13.54□□□□□ -0.24
Vps54-202ENSMUST00000109578 Trim30aP15533 496 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Efcab2Q9CQ46 164 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Sult6b1P0CC03 303 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Limch1Q3UH68 1057 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Cfap58B2RW38 873 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 R3hcc1Q8BSI6 488 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Syde2E9PUP1 1314 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Lmod3E9QA62 571 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Cyp2d34L7N463 504 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Plcd3Q8K2J0 785 aa13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Pes1Q9EQ61 584 aaKnown RBP13.53□□□□□ -0.24
Vps54-202ENSMUST00000109578 Gli3Q61602 1583 aa13.52□□□□□ -0.24
Vps54-202ENSMUST00000109578 Klhl34A2AI76 644 aa13.52□□□□□ -0.24
Vps54-202ENSMUST00000109578 Tsen34Q8BMZ5 316 aa13.52□□□□□ -0.24
Vps54-202ENSMUST00000109578 Pms1Q8K119 917 aa13.52□□□□□ -0.24
Vps54-202ENSMUST00000109578 Syt10Q9R0N4 523 aa13.52□□□□□ -0.24
Vps54-202ENSMUST00000109578 Gm21663A0A0G2JE01 267 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Gm7361D3Z6R1 267 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 5031410I06RikE9Q4E0 267 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Gm1979E9QAN3 267 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Gm5862K7N5V5 267 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Gm10220K7N660 267 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Atg9aQ68FE2 551 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Fsd1Q7TPM6 496 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Trim56Q80VI1 734 aaKnown RBP13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Igflr1Q3U4N7 345 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Kcnq3Q8K3F6 873 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Hnrnpul1Q8VDM6 859 aaKnown RBP13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Bmp2kQ91Z96 1138 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms