RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Itga6Q61739 1091 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Nacc1Q7TSZ8 514 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Def6Q8C2K1 630 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Bsdc1Q80Y55 427 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Lman1Q9D0F3 517 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Traf1P39428 409 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cnot6lQ8VEG6 555 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Zbtb43Q9DAI4 467 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Znf653Q6YND2 615 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Sestd1Q80UK0 696 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Ccdc158Q8CDI6 1109 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Rrbp1Q99PL5 1605 aaKnown RBP13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Usp37Q8C0R0 979 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Phldb2Q8K1N2 1249 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Arhgef6Q8K4I3 771 aa13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 HmcesQ8R1M0 353 aaKnown RBP13.09□□□□□ -0.31
Chd3-202ENSMUST00000108661 Tekt3Q6X6Z7 490 aa13.08□□□□□ -0.31
Chd3-202ENSMUST00000108661 SympkQ80X82 1284 aa13.08□□□□□ -0.31
Chd3-202ENSMUST00000108661 Hfm1D3Z4R1 1434 aa13.08□□□□□ -0.31
Chd3-202ENSMUST00000108661 Eya1P97767 591 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Mx2Q9WVP9 655 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Clip2Q9Z0H8 1047 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Stox1B2RQL2 990 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 DesP31001 469 aaKnown RBP13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Gnat2P50149 354 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Lamb3Q61087 1168 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Cnksr2Q80YA9 1032 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Cd248Q91V98 765 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Adcy10Q8C0T9 1614 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Rbbp8nlA2ABX0 614 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Bicc1Q99MQ1 977 aaKnown RBP13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Rprd2Q6NXI6 1469 aaKnown RBP13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Gbp4Q61107 620 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Tacc1Q6Y685 774 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 Kdm8Q9CXT6 414 aa13.08□□□□□ -0.32
Chd3-202ENSMUST00000108661 PaoxQ8C0L6 504 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Phkg2Q9DB30 406 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Myl3P09542 204 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Parp1P11103 1013 aaKnown RBP13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Spata18Q0P557 537 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Lrrc7Q80TE7 1490 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Trap1aP19473 224 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Dzip1lQ499E4 774 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Fbf1A2A870 1173 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ddx31Q6NZQ2 687 aaKnown RBP13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ssh2Q5SW75 1423 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Col17a1Q07563 1470 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Tbc1d8bA3KGB4 1114 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ctnna2Q61301 953 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Sgsm1Q8BPQ7 1093 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Tmx4Q8C0L0 335 aa13.07□□□□□ -0.32
Chd3-202ENSMUST00000108661 Vps36Q91XD6 386 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Unc13aQ4KUS2 1712 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ampd3O08739 766 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Zfp42P22227 288 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 DymQ8CHY3 669 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 PalldQ9ET54 1408 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Fam83gQ5SWY7 812 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ccdc150Q8CDI7 1110 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Cabp5Q9JLK3 173 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Limch1Q3UH68 1057 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 Pla2g4fQ50L41 855 aa13.06□□□□□ -0.32
Chd3-202ENSMUST00000108661 TprnA2AI08 749 aaKnown RBP13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Grm1P97772 1199 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Tmco3Q8BH01 678 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 TxlnbQ8VBT1 685 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 CenpqQ9CPQ5 267 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Pde1cQ64338 706 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ranbp6Q8BIV3 1105 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Hook3Q8BUK6 718 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ccdc181Q80ZU5 509 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 SltmQ8CH25 1031 aaKnown RBP13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ctnnbl1Q9CWL8 563 aaKnown RBP13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Slc39a6Q8C145 765 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 TxlnaQ6PAM1 554 aaKnown RBP13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Krt79Q8VED5 531 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Pcdhb2Q91Y00 799 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Csrnp1P59054 583 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Kif5bQ61768 963 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Nyap1Q6PFX7 833 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Nop53Q8BK35 484 aaKnown RBP13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Stoml1Q8CI66 399 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Sil1Q9EPK6 465 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Uchl5Q9WUP7 329 aa13.05□□□□□ -0.32
Chd3-202ENSMUST00000108661 Cdcp1Q5U462 833 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Phf23Q8BSN5 401 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ppp1r9bQ6R891 817 aaKnown RBP13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Tbc1d5Q80XQ2 815 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ppfia3P60469 1194 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Cyp2c67Q569X9 491 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Exoc3Q6KAR6 755 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Kiaa1024Q8K3V7 917 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Tax1bp1Q3UKC1 814 aaKnown RBP13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Rdm1Q9CQK3 281 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Riok3Q9DBU3 519 aaKnown RBP13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 LyarQ08288 388 aaKnown RBP13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Olfm5Q8BU90 496 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Pkd2l2Q9JLG4 621 aa13.04□□□□□ -0.32
Chd3-202ENSMUST00000108661 Atp2b1G5E829 1220 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Cpa2Q504N0 417 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms