RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Lmbr1lQ9D1E5 489 aa15.57■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Dpp7Q9ET22 506 aa15.57■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Slfn1Q9Z0I7 337 aa15.57■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Gdf11Q9Z1W4 405 aa15.57■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 BcanQ61361 883 aa15.56■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 CbarpQ66L44 698 aa15.56■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Bend3Q6PAL0 825 aa15.56■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Mphosph10Q810V0 681 aaKnown RBP15.56■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Ccdc171E9Q1U1 1324 aa15.56■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Nrxn2E9Q7X7 1710 aa15.56■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Kiaa0232Q80U59 1396 aaKnown RBP15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Ube4aE9Q735 1028 aa15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Pdzrn3Q69ZS0 1063 aa15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Plekhm2Q80TQ5 1018 aa15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 HlfQ8BW74 295 aa15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Skor1Q8BX46 964 aa15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Ccdc60Q8C4J0 545 aa15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 McamQ8R2Y2 648 aaKnown RBP15.55■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 PnnO35691 725 aaKnown RBP15.54■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Tor1aip2Q8BYU6 502 aa15.54■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Tnip1Q9WUU8 647 aa15.54■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 MarsQ68FL6 902 aaKnown RBP15.53■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Slc39a11Q8BWY7 342 aa15.53■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Thsd7bQ6P4U0 1607 aa15.53■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Zap70P43404 618 aa15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Snrpa1P57784 255 aaKnown RBP15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Aifm3Q3TY86 605 aa15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Ddx46Q569Z5 1032 aaKnown RBP15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Itga6Q61739 1091 aa15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Glis3Q6XP49 780 aa15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Smc4Q8CG47 1286 aa15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Trim26Q99PN3 545 aa15.52■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Carmil3Q3UFQ8 1375 aa15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Cfdp1O88271 295 aaKnown RBP15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Celf1P28659 486 aaKnown RBP15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Il15P48346 162 aa15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 G3bp1P97855 465 aaKnown RBP15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 VeztQ3ZK22 780 aa15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Fbxo33Q8VE08 562 aa15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Popdc2Q9ES82 367 aa15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 NynrinQ5DTZ0 1840 aa15.51■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 1700029H14RikE9PY36 240 aa15.5■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Magea8O89012 320 aa15.5■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Grm8P47743 908 aa15.5■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Gnat3Q3V3I2 354 aa15.5■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 NexnQ7TPW1 607 aa15.5■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 WdpcpQ8C456 722 aa15.5■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Slc51aQ8R000 340 aa15.5■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Rps12P63323 132 aaKnown RBP15.49■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Map3k13Q1HKZ5 959 aa15.49■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Zfp444Q3TDV8 331 aaKnown RBP15.49■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 GmpsQ3THK7 693 aa15.49■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Nol10Q5RJG1 687 aaKnown RBP15.49■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Podxl2Q8CAE9 603 aa15.49■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 CpvlQ9D3S9 478 aa15.49■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 VegfbP49766 207 aa15.48■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Slc38a10Q5I012 1090 aa15.48■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Tmco5bQ80X59 307 aa15.48■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Fzd9Q9R216 592 aa15.48■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Nectin2P32507 530 aa15.47■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 AaasP58742 546 aa15.47■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Nlgn2Q69ZK9 836 aa15.47■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Angel2Q8K1C0 544 aa15.47■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Rtn4Q99P72 1162 aaKnown RBP15.47■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Cdca7Q9D0M2 382 aa15.47■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Ecm29Q6PDI5 1840 aa15.47■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Col3a1P08121 1464 aa15.46■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Psmd14O35593 310 aa15.46■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 NyxP83503 476 aa15.46■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Gm2163Q6PCY5 473 aa15.46■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Plcd4Q8K3R3 807 aa15.46■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Glrx3Q9CQM9 337 aa15.46■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Sall2Q9QX96 1004 aa15.46■□□□□ 0.07
Ccdc28b-202ENSMUST00000106035 Eif3aP23116 1344 aaKnown RBP15.45■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Tbc1d32Q3URV1 1296 aa15.45■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Znf496Q5SXI5 585 aa15.45■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Mmp14P53690 582 aa15.44■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 IntuQ059U7 942 aa15.44■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Micall1Q8BGT6 870 aa15.44■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Ric3Q8BPM6 367 aa15.44■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Slc14a2Q8R4T9 930 aa15.44■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Psme4Q5SSW2 1843 aa15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Rangap1P46061 589 aaKnown RBP15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Cnot7Q60809 285 aa15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Polr3glQ8R0C0 218 aa15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Tmem143Q8VD26 458 aa15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Ascc2Q91WR3 749 aa15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Kcnq5Q9JK45 933 aa15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Tbc1d8Q9Z1A9 1134 aa15.43■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Phrf1A6H619 1682 aa15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Bin2D3Z6Q9 489 aa15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Prl3d2F6R3P9 224 aa15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Llgl2Q3TJ91 1027 aa15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Tmem67Q8BR76 992 aa15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Tm4sf4Q91XD3 202 aa15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Igf2bp3Q9CPN8 579 aaKnown RBP15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Plekho1Q9JIY0 408 aa15.42■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Tpx2A2APB8 745 aaKnown RBP15.41■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Usp17lbE9Q9U0 468 aa15.41■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Ell2Q3UKU1 639 aa15.41■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms