RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ppp1r3fQ9JIG4 799 aa15.4■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Slfn1Q9Z0I7 337 aa15.4■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Eif3aP23116 1344 aaKnown RBP15.4■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Nectin2P32507 530 aa15.39■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Usp48Q3V0C5 1052 aa15.39■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Gnat3Q3V3I2 354 aa15.39■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Slc38a10Q5I012 1090 aa15.39■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 HlfQ8BW74 295 aa15.39■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 WdpcpQ8C456 722 aa15.39■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Gtpbp6Q3U6U5 514 aa15.38■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Tmco5bQ80X59 307 aa15.38■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Skor1Q8BX46 964 aa15.38■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Plekhg6Q8R0J1 787 aa15.38■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Aldh1l1Q8R0Y6 902 aa15.38■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Trim26Q99PN3 545 aa15.38■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Upf1Q9EPU0 1124 aaKnown RBP15.38■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Cfdp1O88271 295 aaKnown RBP15.37■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Snrpa1P57784 255 aaKnown RBP15.37■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Mex3cQ05A36 652 aaKnown RBP15.37■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 EappQ5BU09 281 aa15.37■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Itga6Q61739 1091 aa15.37■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Ric3Q8BPM6 367 aa15.37■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Rbbp6P97868 1790 aaKnown RBP15.36■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Rbm46P86049 533 aa15.36■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Stxbp5lQ5DQR4 1185 aa15.36■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Znfx1Q8R151 1909 aaKnown RBP15.36■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 InsrrQ9WTL4 1300 aa15.36■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Carmil3Q3UFQ8 1375 aa15.36■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Scn11aQ9R053 1765 aa15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 1700029H14RikE9PY36 240 aa15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Celf1P28659 486 aaKnown RBP15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Map3k13Q1HKZ5 959 aa15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Mum1Q6DID5 682 aa15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Smc4Q8CG47 1286 aa15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Slc51aQ8R000 340 aa15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Cfap44E9Q5M6 1843 aa15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Nup98Q6PFD9 1816 aaKnown RBP15.35■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Il15P48346 162 aa15.34■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 PgfP49764 158 aa15.34■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Atp6v1aP50516 617 aaKnown RBP15.34■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 SobpQ0P5V2 864 aa15.34■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Tor1aip2Q8BYU6 502 aa15.34■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Plcd4Q8K3R3 807 aa15.34■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Gdf11Q9Z1W4 405 aa15.34■□□□□ 0.05
Ccdc28a-202ENSMUST00000080860 Slc4a9E9PUP3 929 aa15.33■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Eddm13E9Q7F5 164 aa15.33■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Prl3d2F6R3P9 224 aa15.33■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Znf496Q5SXI5 585 aa15.33■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 BcanQ61361 883 aa15.33■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 DaglaQ6WQJ1 1044 aa15.33■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 NexnQ7TPW1 607 aa15.33■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Tpx2A2APB8 745 aaKnown RBP15.32■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Glis2Q8VDL9 521 aa15.32■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Popdc2Q9ES82 367 aa15.32■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Glt1d1A4FUP9 346 aa15.31■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Dcdc2bF7BCK0 340 aa15.31■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Supt5hO55201 1082 aaKnown RBP15.31■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 AaasP58742 546 aa15.31■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Map9Q3TRR0 646 aa15.31■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Pdzrn3Q69ZS0 1063 aa15.31■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Ccdc93Q7TQK5 629 aa15.31■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Peak1Q69Z38 1735 aa15.3■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Usp34Q6ZQ93 3582 aa15.29■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 NrapQ80XB4 1728 aa15.29■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Stk36Q69ZM6 1316 aa15.29■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Gpr182P43142 395 aa15.29■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Nell2Q61220 819 aa15.29■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Eif6O55135 245 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Tlr7P58681 1050 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 VgfQ0VGU4 617 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Plekhf1Q3TB82 279 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 VeztQ3ZK22 780 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 GpkowQ56A08 488 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Nol10Q5RJG1 687 aaKnown RBP15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Polr3glQ8R0C0 218 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 PdgfdQ925I7 370 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 CpvlQ9D3S9 478 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Fbxo3Q9DC63 480 aa15.28■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Bin2D3Z6Q9 489 aa15.27■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Rps12P63323 132 aaKnown RBP15.27■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Adora1Q60612 326 aa15.27■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Glis3Q6XP49 780 aa15.27■□□□□ 0.04
Ccdc28a-202ENSMUST00000080860 Pcdh15Q99PJ1 1943 aa15.27■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 GabrdP22933 449 aa15.26■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 IntuQ059U7 942 aa15.26■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Tgfb1i1Q62219 461 aa15.26■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Aldh1l2Q8K009 923 aa15.26■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Tmem143Q8VD26 458 aa15.26■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Sh3bp5lQ99LH9 392 aa15.26■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Plekho1Q9JIY0 408 aa15.26■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Prl3d3A0A0M6L0J6 224 aa15.25■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Ftl2P49945 183 aa15.25■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Mmp14P53690 582 aa15.25■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Plbd2Q3TCN2 594 aa15.25■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Ddx46Q569Z5 1032 aaKnown RBP15.25■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Glrx3Q9CQM9 337 aa15.25■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Ankrd44B2RXR6 993 aa15.24■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Ccdc51Q3URS9 406 aa15.24■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Fzd9Q9R216 592 aa15.24■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 AfdnQ9QZQ1 1820 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 70 ms