RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Mx2Q9WVP9 655 aa14.08□□□□□ -0.15
Vcpip1-201ENSMUST00000057438 TnikP83510 1323 aa14.08□□□□□ -0.15
Vcpip1-201ENSMUST00000057438 Ppfia1B2RXQ2 1266 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Polr3aB2RXC6 1390 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 SkiQ60698 725 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ebag9Q9D0V7 213 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Tbc1d8Q9Z1A9 1134 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Izumo3A6PWV3 263 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Kif5cP28738 956 aaKnown RBP14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Stmn2P55821 179 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Bicdl1A0JNT9 577 aa14.08□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 CebpzP53569 1052 aaKnown RBP14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Syt10Q9R0N4 523 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Serpinc1P32261 465 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Hook2Q7TMK6 716 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Sycp2lA0A0M3U1B0 842 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Gm21985Q6P6P5 1106 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Jmjd4Q8BFT6 427 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Fam204aQ8C6C7 236 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Speer4f2E9Q366 295 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Irf9Q61179 399 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Krt8P11679 490 aaKnown RBP14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Hdac9Q99N13 588 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 GnaqP21279 359 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Fam163aQ8CAA5 168 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Zbtb43Q9DAI4 467 aa14.07□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Tsga10Q6NY15 697 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Armc9Q9D2I5 817 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Tacc2Q9JJG0 1149 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Klhl10Q9D5V2 608 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 TchpQ3TVW5 497 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Slc5a1Q8C3K6 665 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Naip2Q9QUK4 1447 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 L3mbtl2P59178 703 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Dzip1lQ499E4 774 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 EappQ5BU09 281 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Tex2Q6ZPJ0 1128 aaKnown RBP14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Haus1Q8BHX1 278 aa14.06□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Gm7347D3YYI9 267 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Zfp213E9QAW0 468 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 HellsQ60848 821 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Zfp397Q7TNK4 527 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Filip1Q9CS72 1211 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Tbc1d7Q9D0K0 293 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Kdm5aQ3UXZ9 1690 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Cacna2d3Q9Z1L5 1091 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ripply1Q2WG77 201 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Micall1Q8BGT6 870 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Usp11Q99K46 921 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Bcar3Q9QZK2 820 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Caskin1Q6P9K8 1431 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ms4a1P19437 291 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Tyro3P55144 880 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Frat2Q8K025 231 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ssx2ipQ8VC66 615 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Gm14025A2AP89 1413 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Gjc1P28229 396 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Agbl1Q09M05 972 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Luc7l2Q7TNC4 392 aaKnown RBP14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 WtapQ9ER69 396 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Gapvd1Q6PAR5 1458 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ubxn1Q922Y1 297 aa14.05□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Psmc4P54775 418 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 EsrrbQ61539 433 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 RragbQ6NTA4 374 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 GphnQ8BUV3 769 aaKnown RBP14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Pym1Q8CHP5 203 aaKnown RBP14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Dpf1Q9QX66 387 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Cyb5rlB1AS42 316 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Rprd2Q6NXI6 1469 aaKnown RBP14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Vps16Q920Q4 839 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Golga1Q9CW79 758 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Nsrp1Q5NCR9 542 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Gtf3c5Q8R2T8 520 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Magi1Q6RHR9 1471 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Slc1a4O35874 532 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Znf692Q3U381 531 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ankrd24Q80VM7 985 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Cep128Q8BI22 1102 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Sugp2Q8CH09 1067 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Eftud2O08810 971 aaKnown RBP14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Dclk3Q8BWQ5 790 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Spats2Q8K1N4 545 aaKnown RBP14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Cwc25Q9DBF7 416 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 AmfrQ9R049 643 aa14.04□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Serpina10Q8R121 448 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Dnm1P39053 867 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Senp1P59110 640 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Krt77Q6IFZ6 572 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Sept14Q9DA97 430 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Letm1Q9Z2I0 738 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ankle2Q6P1H6 964 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Prr29B1ARI9 187 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Vps41Q5KU39 853 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 IqceQ6PCQ0 778 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ppp1r10Q80W00 888 aaKnown RBP14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Tbc1d5Q80XQ2 815 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Plekho1Q9JIY0 408 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Pabpn1lQ5XFR0 273 aa14.03□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 P4ha1Q60715 534 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms