RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 1700029H14RikE9PY36 240 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Brd1E9PZ26 1189 aaKnown RBP10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Atp6v0a2P15920 856 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Atp8a2P98200 1148 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Tango6Q8C3S2 1079 aa10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Edc3Q8K2D3 508 aaKnown RBP10.92□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ildr2B5TVM2 661 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Cfap70D3YVL2 1141 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Rps8P62242 208 aaKnown RBP10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ppp4r2Q0VGB7 417 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Slc39a11Q8BWY7 342 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Znrd1-asQ8R0E5 213 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Lgr5Q9Z1P4 907 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Hoxa7P02830 229 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Mcm2P97310 904 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Gja5Q01231 358 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Plbd2Q3TCN2 594 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Q8C6G1 249 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Rbm17Q8JZX4 405 aaKnown RBP10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Naa16Q9DBB4 864 aa10.91□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Heg1E9Q7X6 1337 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Oas2E9Q9A9 742 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Ccdc146E9Q9F7 977 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Neurod6P48986 337 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Psd3Q2PFD7 1037 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 NfkbibQ60778 359 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Zkscan8Q8BSL0 588 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Dbr1Q923B1 550 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Dydc2Q9D3X8 139 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Fbxo3Q9DC63 480 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 EspnQ9ET47 871 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Cyp46a1Q9WVK8 500 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 Map3k15A2AQW0 1331 aa10.9□□□□□ -0.66
Ccdc28a-201ENSMUST00000052648 B4galnt3Q6L8S8 986 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Fam102bQ8BQS4 339 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 IarsQ8BU30 1262 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 McamQ8R2Y2 648 aaKnown RBP10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Lmnb1P14733 588 aaKnown RBP10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Gsdma2Q32M21 443 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Znf496Q5SXI5 585 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Rab3gap1Q80UJ7 981 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Tmem143Q8VD26 458 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 UvssaQ9D479 717 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Popdc2Q9ES82 367 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Ltn1Q6A009 1767 aa10.89□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Plekhf1Q3TB82 279 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Fhdc1Q3ULZ2 1149 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Sf3a1Q8K4Z5 791 aaKnown RBP10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Sh3bp5Q9Z131 463 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Zfp831A2ADM8 1628 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Nphp3Q7TNH6 1325 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Btaf1E9QAE3 1848 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Myh4Q5SX39 1939 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Pde8bE9Q4S1 865 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Map7O88735 730 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Il15P48346 162 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 4930504O13RikQ8C5Z9 145 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 CpvlQ9D3S9 478 aa10.88□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Ppm1fQ8CGA0 452 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Slc26a8Q8R0C3 999 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Kif18aQ91WD7 886 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Bag3Q9JLV1 577 aaKnown RBP10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Myh3P13541 1940 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 En2P09066 324 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 GabrdP22933 449 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Tgfb2P27090 414 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 IntuQ059U7 942 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Cyp2c67Q569X9 491 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 DbnlQ62418 436 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 HlfQ8BW74 295 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Kcnq2Q9Z351 759 aa10.87□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Pnmal2G3X9N3 661 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Speer4dL7N216 212 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Celf1P28659 486 aaKnown RBP10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Timm10P62073 90 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 NfixP70257 488 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Atp2b3Q0VF55 1220 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Mctp2Q5RJH2 878 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Tbc1d4Q8BYJ6 1307 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Bcar3Q9QZK2 820 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Ppp2r3aB2RXC8 1150 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Dok7Q18PE0 504 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Znf692Q3U381 531 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Ptpdc1Q6NZK8 747 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Atp2b4Q6Q477 1205 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Ciapin1Q8WTY4 309 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 WaslQ91YD9 501 aa10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Eif2s2Q99L45 331 aaKnown RBP10.86□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Arfgef1G3X9K3 1846 aaKnown RBP10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Phlpp2Q8BXA7 1320 aa10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Tpx2A2APB8 745 aaKnown RBP10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Wdr63B2RY71 923 aa10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Pcsk7Q61139 770 aa10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Glg1Q61543 1175 aaKnown RBP10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Ift57Q8BXG3 429 aa10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Myh13B1AR69 1938 aa10.85□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Magea1O89006 320 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Magea5O89009 320 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Magea6O89010 325 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Bend4P86174 541 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms