RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Srek1Q8BZX4 494 aaKnown RBP12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Slc39a6Q8C145 765 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Dnaaf4Q8R368 420 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Pcdhb15Q91Y04 786 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ddx27Q921N6 760 aaKnown RBP12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 BccipQ9CWI3 316 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Zscan29E9Q5B4 869 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Csrnp1P59054 583 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Gas2l3Q3UWW6 683 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Zranb3Q6NZP1 1069 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Dmrt2Q8BG36 561 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Ccz1Q8C1Y8 480 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Plcd3Q8K2J0 785 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 CltcQ68FD5 1675 aaKnown RBP12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Adamts7Q68SA9 1657 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Ctdnep1Q3TP92 244 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Tmem67Q8BR76 992 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Erc1Q99MI1 1120 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Clstn1Q9EPL2 979 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Usp28Q5I043 1051 aa12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Gigyf1Q99MR1 1044 aaKnown RBP12.08□□□□□ -0.48
Trim17-201ENSMUST00000047697 Cdk12Q14AX6 1484 aaKnown RBP12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Calcoco2A2A6M5 331 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Adora1Q60612 326 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Nek11Q8C0Q4 628 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Snw1Q9CSN1 536 aaKnown RBP12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 4930548H24RikQ9D496 437 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Fam50bQ9WTJ8 334 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Msh6P54276 1358 aaKnown RBP12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Serpinb6bO08804 377 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Prl7a2O54831 253 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Kcnj4P52189 445 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 BcanQ61361 883 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Tbc1d30Q69ZT9 766 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Ccdc82Q6PG04 518 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Fam114a1Q9D281 569 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Atp2b1G5E829 1220 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Clec11aO88200 328 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Trim25Q61510 634 aaKnown RBP12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 TfrcQ62351 763 aaKnown RBP12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Lrrc8aQ80WG5 810 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 Sirt1Q923E4 737 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 AceP09470 1312 aa12.07□□□□□ -0.48
Trim17-201ENSMUST00000047697 CemipQ8BI06 1361 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Zbtb21E9Q444 1094 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 NmiO35309 314 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Ccdc102aQ3TMW1 549 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Mns1Q61884 491 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Fkbp5Q64378 456 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Zfp317Q8C0Q5 607 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Kcnk13Q8R1P5 405 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Elf2Q9JHC9 593 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Nol10Q5RJG1 687 aaKnown RBP12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Stxbp4Q9WV89 557 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Sh3bp1P55194 680 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Paxbp1P58501 919 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Prkab2Q6PAM0 271 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Frat2Q8K025 231 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Bmp2kQ91Z96 1138 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Pus3Q9JI38 481 aa12.06□□□□□ -0.48
Trim17-201ENSMUST00000047697 Adcy9P51830 1353 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 LyarQ08288 388 aaKnown RBP12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Gimap6Q8K349 305 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Vps18Q8R307 973 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Tbc1d4Q8BYJ6 1307 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Znf568E9PYI1 671 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Anp32eP97822 260 aaKnown RBP12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Gm21985Q6P6P5 1106 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Ubxn10Q8BG34 277 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 AidaQ8C4Q6 305 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Gnl2Q99LH1 728 aaKnown RBP12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Taf7Q9R1C0 341 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Pnpla7A2AJ88 1352 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Ap5z1Q3U829 807 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 DbnlQ62418 436 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Spag5Q7TME2 1165 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Dnaaf2Q8BPI1 814 aa12.05□□□□□ -0.48
Trim17-201ENSMUST00000047697 Hmx1O70218 332 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Timm10P62073 90 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Nxf7Q80SZ6 620 aaKnown RBP12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Prdm2A2A7B5 1709 aaKnown RBP12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Kif1aP33173 1695 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 U2af1l4Q8BGJ9 220 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Q8BZJ8 459 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 StrbpQ91WM1 672 aaKnown RBP12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Zkscan5Q9Z1D8 819 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Map7d2A2AG50 781 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Ttll7A4Q9F0 912 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Prpf4bQ61136 1007 aaKnown RBP12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Tmem87bQ8BKU8 555 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Mrps25Q9D125 171 aaKnown RBP12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Col1a2Q01149 1372 aa12.04□□□□□ -0.48
Trim17-201ENSMUST00000047697 Samsn1P57725 372 aa12.03□□□□□ -0.48
Trim17-201ENSMUST00000047697 Cdca8Q8BHX3 289 aa12.03□□□□□ -0.48
Trim17-201ENSMUST00000047697 Smc4Q8CG47 1286 aa12.03□□□□□ -0.48
Trim17-201ENSMUST00000047697 Rbm17Q8JZX4 405 aaKnown RBP12.03□□□□□ -0.48
Trim17-201ENSMUST00000047697 Tmx1Q8VBT0 278 aa12.03□□□□□ -0.48
Trim17-201ENSMUST00000047697 Kcnh5Q920E3 988 aa12.03□□□□□ -0.48
Trim17-201ENSMUST00000047697 NefhP19246 1090 aa12.03□□□□□ -0.48
Trim17-201ENSMUST00000047697 Gabpb2P81069 414 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms