RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Tm6sf1P58749 370 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ttc12Q8BW49 704 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Cdca7Q9D0M2 382 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Sil1Q9EPK6 465 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Nucb1Q02819 459 aaKnown RBP13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Rreb1Q3UH06 1700 aaKnown RBP13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Stx8O88983 236 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ccdc66Q6NS45 935 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Znf428Q8C1M2 176 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Paf1Q8K2T8 535 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Tmem2Q5FWI3 1383 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 NppbP40753 121 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Pla2g4fQ50L41 855 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ift74Q8BKE9 600 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Myl6bQ8CI43 207 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Rbm19Q8R3C6 952 aaKnown RBP13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Pmfbp1Q9WVQ0 1022 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Cdhr2E9Q7P9 1308 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Rasa1E9PYG6 1038 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Chl1P70232 1209 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ccdc172Q810N9 267 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Nek11Q8C0Q4 628 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ttc14Q9CSP9 761 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Naa16Q9DBB4 864 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 WtapQ9ER69 396 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Rad50P70388 1312 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Iqgap1Q9JKF1 1657 aaKnown RBP13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Dennd3A2RT67 1274 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 CpvlQ9D3S9 478 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ak2Q9WTP6 239 aa13.82□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Rad23bP54728 416 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ncf1Q09014 390 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Fam193aQ8CGI1 1231 aaKnown RBP13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Trim11Q99PQ2 467 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Slx4ipQ9D7Y9 413 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 P2rx7Q9Z1M0 595 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Zcchc11B2RX14 1644 aaKnown RBP13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 InhbeO08717 350 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 LyarQ08288 388 aaKnown RBP13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Syde2E9PUP1 1314 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Wdr33Q8K4P0 1330 aaKnown RBP13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Hdgfl1Q2VPR5 283 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Fnbp4Q6ZQ03 1031 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 DlatQ8BMF4 642 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Triml1Q8BVP1 470 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Nop14Q8R3N1 860 aaKnown RBP13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ets1P27577 440 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Timm10P62073 90 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Znf697Q569E7 569 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Dhx38Q80X98 1228 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Foxp4Q9DBY0 795 aaKnown RBP13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 A0A0U1RNP2 1173 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Cnnm2Q3TWN3 875 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Adora1Q60612 326 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Setd1bQ8CFT2 1985 aa13.81□□□□□ -0.2
Pcif1-201ENSMUST00000041643 TnksQ6PFX9 1320 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Sycp1Q62209 993 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 DymQ8CHY3 669 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Usp5P56399 858 aaKnown RBP13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Gas2l3Q3UWW6 683 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ifit2Q64112 472 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Hdac6Q9Z2V5 1149 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Pard3Q99NH2 1333 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Nid2O88322 1403 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Znf704Q9ERQ3 566 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ercc6lQ8BHK9 1240 aa13.8□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Bsdc1Q80Y55 427 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Dctn1O08788 1281 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Abca9Q8K449 1623 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Abcc12Q80WJ6 1366 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Nphp3Q7TNH6 1325 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Gm10093D3YYI8 482 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Hdac1O09106 482 aaKnown RBP13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Pip4k2aO70172 405 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Gtf3c3Q3TMP1 882 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Clcn1Q64347 994 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 ImpactO55091 318 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 F2rP30558 430 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ankrd23Q812A3 306 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Disp3A3KFU9 1347 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ercc3P49135 783 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Gnat2P50149 354 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 HellsQ60848 821 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Dcaf5Q80T85 946 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Xrcc4Q924T3 326 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Cul5Q9D5V5 780 aa13.79□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Cdk12Q14AX6 1484 aaKnown RBP13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Myo1bP46735 1107 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Znf653Q6YND2 615 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Zcrb1Q9CZ96 217 aaKnown RBP13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Nap1l5Q9JJF0 156 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 PtpruB1AUH1 1446 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Stox1B2RQL2 990 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Nap1l2P51860 460 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 CoilQ5SU73 570 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ano8Q6PB70 1060 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Ccdc96Q9CR92 584 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Samd1D3YXK1 519 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 U2af1l4Q8BGJ9 220 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Igsf1Q7TQA1 1317 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms