RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Rbbp8nlA2ABX0 614 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 AppP12023 770 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Cdk4P30285 303 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ano10Q8BH79 659 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ccz1Q8C1Y8 480 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Gimap6Q8K349 305 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Clec11aO88200 328 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Nek11Q8C0Q4 628 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Gm10471E9Q1C7 252 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Jarid2Q62315 1234 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Sp8Q8BMJ8 486 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Tmem119Q8R138 280 aa14.12□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Flt4P35917 1363 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ccdc112A0AUP1 442 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Samd1D3YXK1 519 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Zscan29E9Q5B4 869 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 GpkowQ56A08 488 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Nlrp3Q8R4B8 1033 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Taf7Q9R1C0 341 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 AceP09470 1312 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ctdnep1Q3TP92 244 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Mrpl44Q9CY73 333 aaKnown RBP14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Cnpy2Q9QXT0 182 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Rims2Q9EQZ7 1530 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 TrdnE9Q9K5 693 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Zhx1P70121 873 aa14.11□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ms4a1P19437 291 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Usp28Q5I043 1051 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Cdca8Q8BHX3 289 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 StrbpQ91WM1 672 aaKnown RBP14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Kcnh5Q920E3 988 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 CenpqQ9CPQ5 267 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ccdc158Q8CDI6 1109 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Lrrfip2Q91WK0 415 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Zeb2Q9R0G7 1215 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Dlg5E9Q9R9 1921 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Tpm1P58771 284 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Dnaaf2Q8BPI1 814 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Zfp317Q8C0Q5 607 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Chmp7Q8R1T1 451 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Tomm22Q9CPQ3 142 aa14.1□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Aox4Q3TYQ9 1336 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ppfia3P60469 1194 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Cct2P80314 535 aaKnown RBP14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Zkscan4Q5SZT6 480 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Fsd1Q7TPM6 496 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ift57Q8BXG3 429 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Dnajc10Q9DC23 793 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 PtprvP70289 1705 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Kansl3A2RSY1 903 aaKnown RBP14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ifit1Q64282 463 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Atp10bB1AWN4 1474 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Cers3Q1A3B0 383 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Ddx46Q569Z5 1032 aaKnown RBP14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Lrrc8aQ80WG5 810 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Tmem87bQ8BKU8 555 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Tlcd1Q99JT6 247 aa14.09□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Rrp1P56183 494 aaKnown RBP14.08□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Cnnm1Q0GA42 951 aa14.08□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Erc1Q99MI1 1120 aa14.08□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Nup153E9Q3G8 1462 aaKnown RBP14.08□□□□□ -0.15
Rfx1-201ENSMUST00000005600 Tbc1d4Q8BYJ6 1307 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Frat1P70339 274 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Pms1Q8K119 917 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Mon2Q80TL7 1715 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Mtx1P47802 317 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Dnajc14Q921R4 703 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Tmem132aQ922P8 1018 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Arid5bQ8BM75 1188 aaKnown RBP14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 TefQ9JLC6 301 aa14.08□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Cfap99A0A140LIX9 648 aa14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Tsen34Q8BMZ5 316 aa14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Kiaa0232Q80U59 1396 aaKnown RBP14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Vps54Q5SPW0 977 aa14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Kcnk13Q8R1P5 405 aa14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Rufy2Q8R4C2 606 aa14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Chd2E9PZM4 1827 aaKnown RBP14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 DbnlQ62418 436 aa14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Srek1Q8BZX4 494 aaKnown RBP14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Pcdhb15Q91Y04 786 aa14.07□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Adora1Q60612 326 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Atp1a3Q6PIC6 1013 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Aox2Q5SGK3 1345 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 RubcnlQ3TD16 648 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 TfrcQ62351 763 aaKnown RBP14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Gm21985Q6P6P5 1106 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Stk38Q91VJ4 465 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Chmp3Q9CQ10 224 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 D430041D05RikF6ZGR6 1678 aa14.06□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Mst1rQ62190 1378 aa14.05□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Zkscan5Q9Z1D8 819 aa14.05□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Prl7a2O54831 253 aa14.05□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Nkx2-3P97334 362 aa14.05□□□□□ -0.16
Rfx1-201ENSMUST00000005600 TrhQ62361 256 aa14.04□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Tshz2Q68FE9 1030 aa14.04□□□□□ -0.16
Rfx1-201ENSMUST00000005600 BrapQ99MP8 591 aa14.04□□□□□ -0.16
Rfx1-201ENSMUST00000005600 4930548H24RikQ9D496 437 aa14.04□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Atp2b1G5E829 1220 aa14.04□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Q8BZJ8 459 aa14.04□□□□□ -0.16
Rfx1-201ENSMUST00000005600 Ncoa4Q5U4H9 625 aa14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms