RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SH2D2AQ9NP31 389 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 TUBA8Q9NY65 449 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 SCN3BQ9NY72 215 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 TVP23BQ9NYZ1 205 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 SIGLEC7Q9Y286 467 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 TPRKBQ9Y3C4 175 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 SPTBN1Q01082 2364 aaKnown RBP11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TRAV27A0A087WT01 109 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 DPPA5A6NC42 116 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TRIM64CA6NLI5 447 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 PTP4A3O75365 173 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 CH25HO95992 272 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 IGF2P01344 180 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 CCL3P10147 92 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 CASRP41180 1078 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 HTR3AP46098 478 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 PCYT1AP49585 367 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 FXYD6P3P58550 94 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 CSNK2BP67870 215 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TUBA4AP68366 448 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 PGGHGQ32M88 737 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 ZBED5Q49AG3 693 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 SLC22A10Q63ZE4 541 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 POMZP3Q6PJE2 187 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 ZNF773Q6PK81 442 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 SMARCD3Q6STE5 483 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 RTL4Q6ZR62 310 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 SLC46A3Q7Z3Q1 461 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 OAFQ86UD1 273 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 C10orf53Q8N6V4 93 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TCEANCQ8N8B7 351 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 OR8J1Q8NGP2 316 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 OR51A7Q8NH64 312 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 PAQR8Q8TEZ7 354 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 SGCZQ96LD1 299 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 FER1L6-AS2Q96M78 137 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 SLC38A2Q96QD8 506 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TNFRSF13CQ96RJ3 184 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 IL4I1Q96RQ9 567 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TEX12Q9BXU0 123 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 ANGPTL4Q9BY76 406 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 POLDIP3Q9BY77 421 aaKnown RBP11.88□□□□□ -0.51
PHGDH-221ENST00000641573 PRRG3Q9BZD7 231 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 CLN6Q9NWW5 311 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 IL20RAQ9UHF4 553 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 PCDHGB6Q9Y5F9 930 aa11.88□□□□□ -0.51
PHGDH-221ENST00000641573 NBASA2RRP1 2371 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 TMEM72A0PK05 275 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 A6NHS1 94 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 LRRN3E7EW58 273 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 PTGES3LE9PB15 166 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 PRKYO43930 277 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 SUSD5O60279 629 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 TFAP2AP05549 437 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 PRKCAP17252 672 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 BMP7P18075 431 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 ITGA3P26006 1051 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 RPL5P46777 297 aaKnown RBP11.87□□□□□ -0.51
PHGDH-221ENST00000641573 SLC9A3P48764 834 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 DLX5P56178 289 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 EGR4Q05215 589 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 PIGFQ07326 219 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 AIMP2Q13155 320 aaKnown RBP11.87□□□□□ -0.51
PHGDH-221ENST00000641573 INPP5JQ15735 1006 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-221ENST00000641573 SNAPC1Q16533 368 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 ZNF74Q16587 644 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 BORAQ6PGQ7 559 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 ARSKQ6UWY0 536 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 ADGRG3Q86Y34 549 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 GPALPP1Q8IXQ4 340 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 BEST3Q8N1M1 668 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 LRRC17Q8N6Y2 441 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 FADS6Q8N9I5 356 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 WDSUB1Q8N9V3 476 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 OR2T33Q8NG76 320 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 OR4K17Q8NGC6 315 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 SGCDQ92629 289 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 NTNG2Q96CW9 530 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 KTI12Q96EK9 354 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-221ENST00000641573 Q96MT0 163 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 FRMD6Q96NE9 622 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 LHPPQ9H008 270 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 ENKD1Q9H0I2 346 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 UBQLN3Q9H347 655 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 MCCC2Q9HCC0 563 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 PLCXD1Q9NUJ7 323 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 MED17Q9NVC6 651 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 PAK1IP1Q9NWT1 392 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-221ENST00000641573 ZNF337Q9Y3M9 751 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 RELNP78509 3460 aa11.87□□□□□ -0.51
PHGDH-221ENST00000641573 TRAV36DV7A0A075B6V5 113 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 SH3D21A4FU49 640 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ANKRD33BA6NCL7 494 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 FAM47E-STBD1D6RA91 191 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 SNPHO15079 494 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms