RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TAAR8Q969N4 342 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 UTP4Q969X6 686 aaKnown RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 INTS12Q96CB8 462 aaKnown RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 ZNF300Q96RE9 604 aaPredicted RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 PRRG4Q9BZD6 226 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 TIGARQ9NQ88 270 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 PAQR5Q9NXK6 330 aaPredicted RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 NDUFAF4Q9P032 175 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 RNF6Q9Y252 685 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 KIAA1549Q9HCM3 1950 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 ZNF814B7Z6K7 855 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 KPNA4O00629 521 aaPredicted RBP11.8□□□□□ -0.52
GTF3A-209ENST00000640289 SMAD9O15198 467 aaKnown RBP11.8□□□□□ -0.52
GTF3A-209ENST00000640289 PRSS23O95084 383 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 RCBTB2O95199 551 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 AHSA1O95433 338 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 IL2RAP01589 272 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 MT-ND1P03886 318 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 FABP3P05413 133 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 FPR1P21462 350 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 CBLP22681 906 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 AGFG1P52594 562 aaKnown RBP11.8□□□□□ -0.52
GTF3A-209ENST00000640289 PER3P56645 1201 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 ST3GAL3Q11203 375 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 CDSNQ15517 529 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 MTFR2Q6P444 385 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 TTC33Q6PID6 262 aaPredicted RBP11.8□□□□□ -0.52
GTF3A-209ENST00000640289 FCRLAQ7L513 359 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 ABHD3Q8WU67 409 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 SDCCAG3Q96C92 435 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 SLC25A36Q96CQ1 311 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 MPP4Q96JB8 637 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 TM9SF2Q99805 663 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 ZNF426Q9BUY5 554 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 MMADHCQ9H3L0 296 aaPredicted RBP11.8□□□□□ -0.52
GTF3A-209ENST00000640289 RNF122Q9H9V4 155 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 MAN2C1Q9NTJ4 1040 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 CLEC4AQ9UMR7 237 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 TRAPPC4Q9Y296 219 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 NBASA2RRP1 2371 aa11.8□□□□□ -0.52
GTF3A-209ENST00000640289 POLEQ07864 2286 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 TRAV36DV7A0A075B6V5 113 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 AQP12BA6NM10 295 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 FTCDNL1E5RQL4 147 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 LRRN3E7EW58 273 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 PIP5K1CO60331 668 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 RAMP1O60894 148 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 AKR7A3O95154 331 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 BGLAPP02818 100 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 GPIP06744 558 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 THRBP10828 461 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 FCGR2AP12318 317 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 RHCEP18577 417 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 UGT2B15P54855 530 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 SLC35A1P78382 337 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 LSM11P83369 360 aaKnown RBP eCLIP11.79□□□□□ -0.52
GTF3A-209ENST00000640289 LTBQ06643 244 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 GTF3C1Q12789 2109 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 ESPL1Q14674 2120 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 MRGPRGQ86SM5 289 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 CYP4Z1Q86W10 505 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 SPATA24Q86W54 205 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 LIX1LQ8IVB5 337 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 ZDHHC21Q8IVQ6 265 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 CCDC103Q8IW40 242 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 AQP12AQ8IXF9 295 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 ADGRG5Q8IZF4 528 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 PFN4Q8NHR9 129 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 RNF128Q8TEB7 428 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 ITLN2Q8WWU7 325 aaPredicted RBP11.79□□□□□ -0.52
GTF3A-209ENST00000640289 TMEM43Q9BTV4 400 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 TAPBPLQ9BX59 468 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 TRIM15Q9C019 465 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 IL1RAPQ9NPH3 570 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 MEPEQ9NQ76 525 aaPredicted RBP11.79□□□□□ -0.52
GTF3A-209ENST00000640289 KLHL13Q9P2N7 655 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 SEC14L4Q9UDX3 406 aa11.79□□□□□ -0.52
GTF3A-209ENST00000640289 FAM32AQ9Y421 112 aaKnown RBP11.79□□□□□ -0.52
GTF3A-209ENST00000640289 WIPF3A6NGB9 483 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 HSPB2A8KAH6 182 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 TMIGD3P0DMS9 266 aaPredicted RBP11.78□□□□□ -0.52
GTF3A-209ENST00000640289 ITGA2P17301 1181 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 GRPRP30550 384 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 IFNA8P32881 189 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 MAGEA2P43356 314 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 SMSP52788 366 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 SIRPAP78324 504 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 CHRNB3Q05901 458 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 TRAM2Q15035 370 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 HSPB2Q16082 182 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 FAM69AQ5T7M9 428 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 ABLIM2Q6H8Q1 611 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 C5orf46Q6UWT4 87 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 MCEMP1Q8IX19 187 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 TMEM99Q8N816 258 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 PIK3C3Q8NEB9 887 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 OR52J3Q8NH60 311 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms