RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 CHATP28329 748 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 NOVP48745 357 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 HOXA4Q00056 320 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-218ENST00000640036 CNN3Q15417 329 aaKnown RBP4.65□□□□□ -1.66
SCN1A-218ENST00000640036 COMMD6Q7Z4G1 85 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 GOLM1Q8NBJ4 401 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 FANK1Q8TC84 345 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 ATF6BQ99941 703 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 TNFRSF19Q9NS68 423 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 STEAP1Q9UHE8 339 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 EGFL7Q9UHF1 273 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 CORINQ9Y5Q5 1042 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 IFNA17P01571 189 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 SSTR2P30874 369 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 EDDM3BP56851 147 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 IL18Q14116 193 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 MPPED2Q15777 294 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 LRRC10Q5BKY1 277 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 OR5J2Q8NH18 312 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 OR51A7Q8NH64 312 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 GNPDA2Q8TDQ7 276 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 PIGCQ92535 297 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 HAS2Q92819 552 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 UPRTQ96BW1 309 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 PLEKHA3Q9HB20 300 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 ACOXLQ9NUZ1 547 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 TVP23BQ9NYZ1 205 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 ZIM2Q9NZV7 527 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 NME7Q9Y5B8 376 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 FAM230AA0A1W2PPH8 454 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 OTOL1A6NHN0 477 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-218ENST00000640036 C19orf67A6NJJ6 358 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 WDR1O75083 606 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 CLEC3BP05452 202 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 TAS2R43P59537 309 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 SLC25A11Q02978 314 aaKnown RBP4.65□□□□□ -1.66
SCN1A-218ENST00000640036 BST1Q10588 318 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 NADSYN1Q6IA69 706 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 TMPRSS7Q7RTY8 843 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 GALNT10Q86SR1 603 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 METTL2AQ96IZ6 378 aaKnown RBP4.65□□□□□ -1.66
SCN1A-218ENST00000640036 RNF170Q96K19 258 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 BOCQ9BWV1 1114 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 OR51I1Q9H343 314 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 VNN3Q9NY84 501 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 SLCO1C1Q9NYB5 712 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 KCNMB2Q9Y691 235 aa4.65□□□□□ -1.66
SCN1A-218ENST00000640036 A6NHS1 94 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 NXPH2O95156 264 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 PROCP04070 461 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 SLC35E2P0CK97 266 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 C7P10643 843 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ANXA8P13928 327 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 FZD2Q14332 565 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 FAM162BQ5T6X4 162 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 FAM83HQ6ZRV2 1179 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 TRABD2AQ86V40 505 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 NLRP8Q86W28 1048 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 CCDC71Q8IV32 467 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ZDHHC21Q8IVQ6 265 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 LMNTD1Q8N9Z9 388 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 PIK3IP1Q96FE7 263 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 SLC41A3Q96GZ6 507 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 OXNAD1Q96HP4 312 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 MSLNLQ96KJ4 702 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 S1PR5Q9H228 398 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 BCO1Q9HAY6 547 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 RLIMQ9NVW2 624 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 HAO2Q9NYQ3 351 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 DNAJC27Q9NZQ0 273 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 CACFD1Q9UGQ2 172 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 PLLPQ9Y342 182 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 MTCL1Q9Y4B5 1905 aaKnown RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ZFHX2Q9C0A1 2572 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ARPC4-TTLL3A0A0A6YYG9 625 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 A0A1W2PRQ8 180 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 FBP2O00757 339 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ZMPSTE24O75844 475 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 OR2J2O76002 312 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 BPGMP07738 259 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 GNAO1P09471 354 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 CCL4P13236 92 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 CD53P19397 219 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 MSX2P35548 267 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF83P51522 516 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 HADHBP55084 474 aaKnown RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 TAS2R31P59538 309 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 GNG2P59768 71 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 NKX3-2P78367 333 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 GANABQ14697 944 aaKnown RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 PTPRRQ15256 657 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 BCL7AQ4VC05 210 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 PLCXD3Q63HM9 321 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 CLEC14AQ86T13 490 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 FAM83FQ8NEG4 500 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM185AQ8NFB2 350 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 FBXO8Q9NRD0 319 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 INIPQ9NRY2 104 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 GNG12Q9UBI6 72 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms