RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CD8BP10966 210 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 IL7P13232 177 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 AZGP1P25311 298 aaKnown RBP13.81□□□□□ -0.2
TRIM3-215ENST00000639856 ANGPT1Q15389 498 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 KLHL26Q53HC5 615 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 FAAH2Q6GMR7 532 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 XKRXQ6PP77 449 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 LANCL3Q6ZV70 420 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 OR7G1Q8NGA0 311 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 TXNDC15Q96J42 360 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 ART5Q96L15 291 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 ERMAPQ96PL5 475 aaPredicted RBP13.81□□□□□ -0.2
TRIM3-215ENST00000639856 MESP1Q9BRJ9 268 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 ADGRL4Q9HBW9 690 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 TRIM36Q9NQ86 728 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 OCIAD1Q9NX40 245 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 FBXL4Q9UKA2 621 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 ICAM5Q9UMF0 924 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 SRPK3Q9UPE1 567 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 SHISA3A0PJX4 238 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 GTPBP1O00178 669 aaKnown RBP13.8□□□□□ -0.2
TRIM3-215ENST00000639856 SCRG1O75711 98 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 NDUFB2O95178 105 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 IGKV3-11P04433 115 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 MRPL3P09001 348 aaKnown RBP13.8□□□□□ -0.2
TRIM3-215ENST00000639856 EIF2B2P49770 351 aaKnown RBP13.8□□□□□ -0.2
TRIM3-215ENST00000639856 GPALPP1Q8IXQ4 340 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 ZNF440Q8IYI8 595 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 ZNF721Q8TF20 911 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 EFHD2Q96C19 240 aaPredicted RBP13.8□□□□□ -0.2
TRIM3-215ENST00000639856 SGTBQ96EQ0 304 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 LRFN5Q96NI6 719 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 GFM1Q96RP9 751 aaKnown RBP13.8□□□□□ -0.2
TRIM3-215ENST00000639856 ARRDC1-AS1Q9H2J1 176 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 TIGARQ9NQ88 270 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 CHRNA9Q9UGM1 479 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 RARRES3Q9UL19 164 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 SIRT4Q9Y6E7 314 aaPredicted RBP13.8□□□□□ -0.2
TRIM3-215ENST00000639856 COL5A1P20908 1838 aaPredicted RBP13.8□□□□□ -0.2
TRIM3-215ENST00000639856 CFAP54Q96N23 3096 aa13.8□□□□□ -0.2
TRIM3-215ENST00000639856 C2orf92A0A1B0GVN3 265 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 POLR1CO15160 346 aaPredicted RBP13.79□□□□□ -0.2
TRIM3-215ENST00000639856 PPM1BO75688 479 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 RGS9O75916 674 aaPredicted RBP13.79□□□□□ -0.2
TRIM3-215ENST00000639856 MT-ND5P03915 603 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 SYPP08247 313 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 MPLP40238 635 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 PPP3R1P63098 170 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 POU4F2Q12837 409 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 ELAVL1Q15717 326 aaKnown RBP13.79□□□□□ -0.2
TRIM3-215ENST00000639856 SLITRK4Q8IW52 837 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 GDPD1Q8N9F7 314 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 ZBTB8BQ8NAP8 495 aaPredicted RBP13.79□□□□□ -0.2
TRIM3-215ENST00000639856 OR52E2Q8NGJ4 325 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 OR5M3Q8NGP4 307 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 OR5W2Q8NH69 310 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 KIAA1143Q96AT1 154 aaPredicted RBP13.79□□□□□ -0.2
TRIM3-215ENST00000639856 CTRCQ99895 268 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 NUDT9Q9BW91 350 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 NXF5Q9H1B4 397 aaKnown RBP13.79□□□□□ -0.2
TRIM3-215ENST00000639856 KCNN2Q9H2S1 579 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 SSX4O60224 188 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 TMCC2O75069 709 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 GYPBP06028 91 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 CFL1P23528 166 aaKnown RBP13.79□□□□□ -0.2
TRIM3-215ENST00000639856 ADH7P40394 386 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 FAM71CQ8NEG0 241 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 STT3BQ8TCJ2 826 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 SMPDL3BQ92485 455 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 C3orf49Q96BT1 292 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 ATF6BQ99941 703 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 NRSN2Q9GZP1 204 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 UBQLN4Q9NRR5 601 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 SACM1LQ9NTJ5 587 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 COMMD3Q9UBI1 195 aa13.79□□□□□ -0.2
TRIM3-215ENST00000639856 KIF26BQ2KJY2 2108 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 IGHV3-20A0A0C4DH32 117 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 A0A1W2PQ09 198 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 D6RAR5 112 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 PLPP2O43688 288 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 HIST1H1CP16403 213 aaKnown RBP13.78□□□□□ -0.2
TRIM3-215ENST00000639856 CD53P19397 219 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 PPICP45877 212 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 ACTC1P68032 377 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 ACTA1P68133 377 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 ZNF85Q03923 595 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 SCN1BQ07699 218 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 NKAIN1Q4KMZ8 207 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 FNDC7Q5VTL7 733 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 ZNF527Q8NB42 609 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 OIT3Q8WWZ8 545 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 SLC46A1Q96NT5 459 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 GAL3ST4Q96RP7 486 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 ZMIZ1Q9ULJ6 1067 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 MPDZO75970 2070 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 CDC14CA4D256 554 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms